Curated BLAST for Genomes

 

Curated BLAST

Searching in Alkalitalea saponilacus SC/BZ-SP2 (GCF_002201795.1)

Found 35 curated entries in PaperBLAST's database that match '1.1.1.9' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Alkalitalea saponilacus SC/BZ-SP2, or try another query

CDL62_RS06345 CDL62_06345 WP_079555960.1: zinc-binding dehydrogenase
is similar to:
PaperBLAST

DHSO_HUMAN / Q00796: Sorbitol dehydrogenase; SDH; (R,R)-butanediol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.4; EC 1.1.1.14; EC 1.1.1.56; EC 1.1.1.9 from Homo sapiens

32% id,
98% cov

DHSO_MOUSE / Q64442: Sorbitol dehydrogenase; SDH; SORD; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Mus musculus

33% id,
94% cov

DHSO_BOVIN / Q58D31: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bos taurus

32% id,
94% cov

More...

CDL62_RS01225 CDL62_01225 WP_079557497.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

31% id,
99% cov

CDL62_RS17615 CDL62_17615 WP_079557865.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

31% id,
100% cov

tdh CDL62_RS14220 CDL62_14220 WP_232468323.1: L-threonine 3-dehydrogenase
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

31% id,
97% cov

DHSO_BOVIN / Q58D31: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bos taurus

29% id,
98% cov

PS417_17720: xylitol 2-dehydrogenase (EC 1.1.1.9) from Pseudomonas simiae

28% id,
98% cov

More...

CDL62_RS06765 CDL62_06765 WP_079555883.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

30% id,
98% cov

CDL62_RS02165 CDL62_02165 WP_198314211.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

29% id,
99% cov

CDL62_RS01185 CDL62_01185 WP_079557489.1: gluconate 5-dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

28% id,
98% cov

CDL62_RS18045 CDL62_18045 WP_079557785.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

27% id,
96% cov

fabG CDL62_RS16365 CDL62_16365 WP_079556784.1: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

34% id,
77% cov

CDL62_RS11830 CDL62_11830 WP_079556515.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

34% id,
71% cov

CDL62_RS02160 CDL62_02160 WP_079557164.1: zinc-binding dehydrogenase
is similar to:
PaperBLAST

sdhA / A2QM95: L-arabinitol dehydrogenase (EC 1.1.1.12; EC 1.1.1.9; EC 1.1.1.14) from Aspergillus niger

25% id,
83% cov

Q6KAV2: D-xylulose reductase (EC 1.1.1.9) from Blastobotrys adeninivorans

26% id,
58% cov

DHSO_RAT / P27867: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Rattus norvegicus

32% id,
24% cov

More...

CDL62_RS01850 CDL62_01850 WP_079557211.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

29% id,
70% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 12 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory