Curated BLAST for Genomes

 

Curated BLAST

Searching in Secundilactobacillus silagei JCM 19001 IWT126 (GCF_002217945.1)

Found 2 curated entries in PaperBLAST's database that match '1.5.1.12' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Secundilactobacillus silagei JCM 19001 IWT126, or try another query

aldA CES79_RS01180 IWT126_00241 WP_089136075.1: aldehyde dehydrogenase
is similar to:
PaperBLAST

putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli

28% id,
34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory