Curated BLAST for Genomes

 

Curated BLAST

Searching in Secundilactobacillus silagei JCM 19001 IWT126 (GCF_002217945.1)

Found 9 curated entries in PaperBLAST's database that match '2.7.1.7' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Secundilactobacillus silagei JCM 19001 IWT126, or try another query

CES79_RS01675 IWT126_00339 WP_225362276.1: ROK family protein
is similar to:
PaperBLAST

rokA / Q5GBH5: glucokinase / N-acetylglucosamine kinase / mannokinase (EC 2.7.1.7; EC 2.7.1.1; EC 2.7.1.59) from Bacteroides fragilis

36% id,
94% cov

CES79_RS06025 IWT126_01217 WP_054655034.1: ROK family glucokinase
is similar to:
PaperBLAST

rokA / Q5GBH5: glucokinase / N-acetylglucosamine kinase / mannokinase (EC 2.7.1.7; EC 2.7.1.1; EC 2.7.1.59) from Bacteroides fragilis

33% id,
96% cov

SMc03109: Mannokinase (EC 2.7.1.7) from Sinorhizobium meliloti

31% id,
99% cov

Mak / b0394: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli
mak / P23917: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli

30% id,
98% cov

CES79_RS11525 IWT126_02323 WP_089137286.1: ROK family protein
is similar to:
PaperBLAST

rokA / Q5GBH5: glucokinase / N-acetylglucosamine kinase / mannokinase (EC 2.7.1.7; EC 2.7.1.1; EC 2.7.1.59) from Bacteroides fragilis

24% id,
93% cov

SMc03109: Mannokinase (EC 2.7.1.7) from Sinorhizobium meliloti

26% id,
55% cov

CES79_RS08010 IWT126_01612 WP_089136858.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

SMc03109: Mannokinase (EC 2.7.1.7) from Sinorhizobium meliloti

24% id,
73% cov

rokA / Q5GBH5: glucokinase / N-acetylglucosamine kinase / mannokinase (EC 2.7.1.7; EC 2.7.1.1; EC 2.7.1.59) from Bacteroides fragilis

27% id,
63% cov

CES79_RS11515 IWT126_02321 WP_054656236.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

rokA / Q5GBH5: glucokinase / N-acetylglucosamine kinase / mannokinase (EC 2.7.1.7; EC 2.7.1.1; EC 2.7.1.59) from Bacteroides fragilis

24% id,
52% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory