Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Brucella thiophenivorans DSM 7216 (GCF_002252445.1)

Found 51 curated entries in PaperBLAST's database that match '5.4.2.2' as complete word(s).

These curated entries have 35 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Brucella thiophenivorans DSM 7216, or try another query

CEV31_RS05910 CEV31_1276 WP_094506085.1: alpha-D-glucose phosphate-specific phosphoglucomutase is similar to:	PaperBLAST
PGM1_RABIT / P00949: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Oryctolagus cuniculus	55% id, 99% cov
PGM1_HUMAN / P36871: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Homo sapiens PGM1 / P36871: phosphoglucomutase-1 (EC 5.4.2.2) from Homo sapiens P36871: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Homo sapiens	54% id, 99% cov
PGM1_RAT / P38652: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Rattus norvegicus	54% id, 99% cov
Q9SGC1: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Arabidopsis thaliana	53% id, 99% cov
PGM_EMENI / Q9P931: Phosphoglucomutase; PGM; Glucose phosphomutase; EC 5.4.2.2 from Emericella nidulans pgmB: phosphoglucomutase; EC 5.4.2.2 from Emericella nidulans	52% id, 100% cov
PGMC1_MAIZE / P93804: Phosphoglucomutase, cytoplasmic 1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Zea mays P93804: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Zea mays	52% id, 99% cov
O49299: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Arabidopsis thaliana	52% id, 99% cov
P93805: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Zea mays	52% id, 99% cov
A0A2H5BEG8: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Ganoderma lucidum	52% id, 99% cov
PGM_SCHPO / O74374: Phosphoglucomutase; PGM; Glucose phosphomutase; EC 5.4.2.2 from Schizosaccharomyces pombe	51% id, 100% cov
A8N8Z1: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Coprinopsis cinerea	53% id, 96% cov
PGM_DROME / Q9VUY9: Phosphoglucomutase; PGM; Glucose phosphomutase; EC 5.4.2.2 from Drosophila melanogaster	50% id, 100% cov
Q4QCF1: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Leishmania major	49% id, 100% cov
PGM2_YEAST / P37012: Phosphoglucomutase 2; PGM 2; D-glucose-1,6-diphosphate:D-glucose-1-phosphate phosphotransferase; Glucose phosphomutase 2; EC 5.4.2.2 from Saccharomyces cerevisiae PGM2 / P37012: phosphoglucomutase-2 (EC 5.4.2.2) from Saccharomyces cerevisiae	49% id, 99% cov
Q670S5: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Trypanosoma cruzi	48% id, 100% cov
PGMP_ARATH / Q9SCY0: Phosphoglucomutase, chloroplastic; PGM; Glucose phosphomutase; Protein REDUCED GRAVITROPIC 2; EC 5.4.2.2 from Arabidopsis thaliana PGM / Q9SCY0: phosphoglucomutase (α-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Arabidopsis thaliana Q9SCY0: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Arabidopsis thaliana	54% id, 89% cov
PGM1_PARTE / P47244: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; Parafusin; Pf; pp63; EC 5.4.2.2 from Paramecium tetraurelia	49% id, 99% cov
PGMP1_MARPO / A0A2R6W0K6: Phosphoglucomutase 1, chloroplastic; MpPGM1; Glucose phosphomutase; EC 5.4.2.2 from Marchantia polymorpha	56% id, 85% cov
PGM1_YEAST / P33401: Phosphoglucomutase 1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Saccharomyces cerevisiae PGM1 / P33401: phosphoglucomutase-1 (EC 5.4.2.2) from Saccharomyces cerevisiae	47% id, 99% cov
PGM_ENTH1 / O15820: Phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Entamoeba histolytica	45% id, 99% cov
C6L2E2: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Toxoplasma gondii	50% id, 66% cov
A0A0H3NJ17: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Salmonella enterica Q8ZQW9: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Salmonella enterica	27% id, 83% cov
PGM_ECOLI / P36938: Phosphoglucomutase; PGM; Glucose phosphomutase; EC 5.4.2.2 from Escherichia coli Blu / b0688: phosphoglucomutase (EC 5.4.2.2) from Escherichia coli pgm / GB\|ABB65241.1: phosphoglucomutase; EC 5.4.2.2 from Escherichia coli pgm / P36938: phosphoglucomutase (EC 5.4.2.2) from Escherichia coli	27% id, 83% cov
PGCA_BACSU / P18159: Phosphoglucomutase; PGM; Alpha-phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Bacillus subtilis pgcA / P18159: α-phosphoglucomutase (EC 5.4.2.2) from Bacillus subtilis	23% id, 93% cov
C6L2E2: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Toxoplasma gondii	42% id, 25% cov
More...

glmM CEV31_RS03255 CEV31_0693 WP_210190873.1: phosphoglucosamine mutase is similar to:	PaperBLAST
PGMMM_THEKO / Q68BJ6: Phosphoglucomutase/phosphomannomutase; PGM/PMM; EC 5.4.2.2; EC 5.4.2.8 from Thermococcus kodakarensis	37% id, 95% cov
Q980S1: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2); phosphomannomutase (EC 5.4.2.8) from Saccharolobus solfataricus	31% id, 99% cov
Q8PGN7: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Xanthomonas citri	27% id, 99% cov
M1T754: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2); phosphomannomutase (EC 5.4.2.8) from Sphingomonas sanxanigenens	28% id, 95% cov
ALGC_PSEAE / P26276: Phosphomannomutase/phosphoglucomutase; PMM / PGM; EC 5.4.2.2; EC 5.4.2.8 from Pseudomonas aeruginosa algC / P26276: phosphomannomutase (EC 5.4.2.2; EC 5.4.2.8) from Pseudomonas aeruginosa	27% id, 96% cov
PGM1_HUMAN / P36871: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Homo sapiens PGM1 / P36871: phosphoglucomutase-1 (EC 5.4.2.2) from Homo sapiens P36871: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Homo sapiens	26% id, 71% cov
PGCA_BACSU / P18159: Phosphoglucomutase; PGM; Alpha-phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Bacillus subtilis pgcA / P18159: α-phosphoglucomutase (EC 5.4.2.2) from Bacillus subtilis	27% id, 69% cov
PGM1_RABIT / P00949: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Oryctolagus cuniculus	26% id, 71% cov
PGM1_RAT / P38652: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Rattus norvegicus	26% id, 71% cov
PGM2_HUMAN / Q96G03: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-2; EC 5.4.2.7; EC 5.4.2.2 from Homo sapiens PGM2 / Q96G03: phosphoglucomutase-2 (EC 5.4.2.2; EC 5.4.2.7) from Homo sapiens	22% id, 74% cov
PGM2_MOUSE / Q7TSV4: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-1; Phosphoglucomutase-2; PGM 2; EC 5.4.2.7; EC 5.4.2.2 from Mus musculus	21% id, 73% cov
PGCA_STAA8 / Q2FVC1: Phosphoglucomutase; PGM; Alpha-phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Staphylococcus aureus	25% id, 61% cov
C6L2F4: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Toxoplasma gondii	30% id, 24% cov
More...

CEV31_RS19715 CEV31_3971 WP_094509792.1: phosphomannomutase is similar to:	PaperBLAST
ALGC_PSEAE / P26276: Phosphomannomutase/phosphoglucomutase; PMM / PGM; EC 5.4.2.2; EC 5.4.2.8 from Pseudomonas aeruginosa algC / P26276: phosphomannomutase (EC 5.4.2.2; EC 5.4.2.8) from Pseudomonas aeruginosa	27% id, 52% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory