Curated BLAST for Genomes

 

Curated BLAST

Searching in Nocardiopsis gilva YIM 90087 (GCF_002263495.1)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Nocardiopsis gilva YIM 90087, or try another query

CDO52_RS11555 CDO52_11540 WP_017617089.1: ROK family glucokinase
is similar to:
PaperBLAST

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

52% id,
100% cov

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

51% id,
98% cov

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

35% id,
96% cov

More...

CDO52_RS05395 CDO52_05385 WP_017620227.1: ROK family glucokinase
is similar to:
PaperBLAST

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

51% id,
100% cov

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

48% id,
98% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

35% id,
97% cov

More...

CDO52_RS13700 CDO52_13685 WP_017616663.1: ROK family protein
is similar to:
PaperBLAST

PPGK_MYCTA / A5U654: Polyphosphate glucokinase; Poly(P) glucokinase; ATP-dependent glucokinase; Polyphosphate--glucose phosphotransferase; EC 2.7.1.63; EC 2.7.1.2 from Mycobacterium tuberculosis
PPGK_MYCTU / P9WIN1: Polyphosphate glucokinase; Poly(P) glucokinase; ATP-dependent glucokinase; Polyphosphate--glucose phosphotransferase; EC 2.7.1.63; EC 2.7.1.2 from Mycobacterium tuberculosis

54% id,
92% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

26% id,
53% cov

glk CDO52_RS15325 CDO52_15310 WP_017619056.1: glucokinase
is similar to:
PaperBLAST

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC 2.7.1.2 from Escherichia coli
Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli

42% id,
97% cov

PS417_22685: Glucokinase (EC 2.7.1.2) from Pseudomonas simiae

40% id,
98% cov

Dshi_1655: glucokinase (EC 2.7.1.2) from Dinoroseobacter shibae

33% id,
97% cov

More...

CDO52_RS04425 CDO52_04415 WP_193373712.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

32% id,
99% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

30% id,
98% cov

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

29% id,
99% cov

More...

CDO52_RS18120 CDO52_18105 WP_017618221.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

31% id,
99% cov

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

29% id,
97% cov

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

28% id,
97% cov

More...

CDO52_RS24645 CDO52_24630 WP_017618846.1: galactokinase family protein
is similar to:
PaperBLAST

B1KRG2: glucokinase (EC 2.7.1.2) from Shewanella woodyi

31% id,
97% cov

B1KDE7: glucokinase (EC 2.7.1.2) from Shewanella woodyi

31% id,
93% cov

B1KD89: glucokinase (EC 2.7.1.2) from Shewanella woodyi

31% id,
91% cov

CDO52_RS15310 CDO52_15295 WP_017619054.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

30% id,
97% cov

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

31% id,
92% cov

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

32% id,
86% cov

More...

CDO52_RS11085 CDO52_11070 WP_017617185.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

28% id,
100% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

26% id,
98% cov

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

30% id,
79% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory