Curated BLAST for Genomes

 

Curated BLAST

Searching in Rubrivirga marina SAORIC-28 (GCF_002283365.1)

Found 63 curated entries in PaperBLAST's database that match '2.3.1.9' as complete word(s).

These curated entries have 52 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Rubrivirga marina SAORIC-28, or try another query

BSZ37_RS16360 BSZ37_16420 WP_095511582.1: thiolase family protein
is similar to:
PaperBLAST

ERG10_SCHPO / Q9UQW6: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Ergosterol biosynthesis protein 10; EC 2.3.1.9 from Schizosaccharomyces pombe

54% id,
98% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
P76461: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Escherichia coli

54% id,
98% cov

THIL_CUPNH / P14611: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Cupriavidus necator
P14611: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Cupriavidus necator

53% id,
99% cov

More...

BSZ37_RS15460 BSZ37_15515 WP_095511417.1: acetyl-CoA C-acyltransferase
is similar to:
PaperBLAST

THLA_SYNWW / Q0AVM3: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; EC 2.3.1.9 from Syntrophomonas wolfei

43% id,
100% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
P76461: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Escherichia coli

43% id,
100% cov

PfGW456L13_2411: Acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Pseudomonas fluorescens

42% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory