Curated BLAST for Genomes

 

Curated BLAST

Searching in Marinobacter guineae M3B (GCF_002744735.1)

Found 3 curated entries in PaperBLAST's database that match '2-deoxy-D-ribonate 3-dehydrogenase' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 15 relevant proteins in Marinobacter guineae M3B, or try another query

CLH62_RS16090 CLH62_16090 WP_099619199.1: SDR family oxidoreductase
is similar to:
PaperBLAST

BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans

33% id,
94% cov

H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila

33% id,
94% cov

CLH62_RS10280 CLH62_10275 WP_099618067.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae

33% id,
94% cov

H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila

32% id,
94% cov

BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans

32% id,
94% cov

CLH62_RS08955 CLH62_08950 WP_228152851.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae

32% id,
94% cov

BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans

31% id,
94% cov

CLH62_RS00775 CLH62_00775 WP_099616258.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila

31% id,
94% cov

PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae

29% id,
97% cov

BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans

29% id,
94% cov

CLH62_RS16375 CLH62_16370 WP_099619254.1: SDR family oxidoreductase
is similar to:
PaperBLAST

PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae

30% id,
96% cov

H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila

30% id,
95% cov

BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans

29% id,
96% cov

CLH62_RS10265 CLH62_10260 WP_099618064.1: SDR family oxidoreductase
is similar to:
PaperBLAST

H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila

30% id,
94% cov

CLH62_RS03815 CLH62_03815 WP_099616799.1: 3-oxoacyl-ACP reductase
is similar to:
PaperBLAST

BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans

28% id,
96% cov

CLH62_RS09320 CLH62_09315 WP_099617891.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila

28% id,
94% cov

PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae

28% id,
94% cov

BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans

27% id,
94% cov

CLH62_RS09785 CLH62_09780 WP_228152819.1: SDR family oxidoreductase
is similar to:
PaperBLAST

PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae

27% id,
94% cov

CLH62_RS04845 CLH62_04845 WP_099616990.1: SDR family oxidoreductase
is similar to:
PaperBLAST

BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans

26% id,
97% cov

CLH62_RS16390 CLH62_16385 WP_099619257.1: SDR family oxidoreductase
is similar to:
PaperBLAST

PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae

29% id,
84% cov

H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila

27% id,
84% cov

BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans

26% id,
84% cov

CLH62_RS14475 CLH62_14475 WP_099618915.1: YciK family oxidoreductase
is similar to:
PaperBLAST

H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila

32% id,
76% cov

PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae

28% id,
81% cov

CLH62_RS09810 CLH62_09805 WP_099617980.1: SDR family oxidoreductase
is similar to:
PaperBLAST

PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae

31% id,
68% cov

CLH62_RS16095 CLH62_16095 WP_099619200.1: SDR family oxidoreductase
is similar to:
PaperBLAST

PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae

30% id,
70% cov

CLH62_RS05685 CLH62_05685 WP_099617144.1: SDR family oxidoreductase
is similar to:
PaperBLAST

H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila

24% id,
76% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 14 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory