Curated BLAST for Genomes

 

Curated BLAST

Searching in Epibacterium ulvae U95 (GCF_002796795.1)

Found 30 curated entries in PaperBLAST's database that match '1.2.1.11' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Epibacterium ulvae U95, or try another query

CV091_RS11950 WP_090218993.1: aspartate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

DHAS2_VIBCH / P23247: Aspartate-semialdehyde dehydrogenase 2; ASA dehydrogenase 2; ASADH 2; Aspartate-beta-semialdehyde dehydrogenase 2; EC 1.2.1.11 from Vibrio cholerae

50% id,
98% cov

asd / Q04797: aspartate semialdehyde dehydrogenase subunit (EC 1.2.1.11) from Bacillus subtilis

47% id,
98% cov

DHAS_MYCTU / P9WNX5: Aspartate-semialdehyde dehydrogenase; ASA dehydrogenase; ASADH; Aspartate-beta-semialdehyde dehydrogenase; EC 1.2.1.11 from Mycobacterium tuberculosis
P9WNX5: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Mycobacterium tuberculosis

43% id,
100% cov

More...

CV091_RS10110 WP_090217872.1: hypothetical protein
is similar to:
PaperBLAST

DHAS_CRYNJ / Q5KPK7: Aspartate-semialdehyde dehydrogenase; EC 1.2.1.11 from Cryptococcus neoformans
Q5KPK7: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Cryptococcus neoformans

27% id,
65% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory