Curated BLAST for Genomes

 

Curated BLAST

Searching in Pontibacter ramchanderi LP43 (GCF_002846395.1)

Found 60 curated entries in PaperBLAST's database that match '5.1.3.2' as complete word(s).

These curated entries have 42 distinct sequences.

Running ublast with E ≤ 0.01

Found 17 relevant proteins in Pontibacter ramchanderi LP43, or try another query

galE BD749_RS10905 BD749_2226 WP_101444364.1: UDP-glucose 4-epimerase GalE
is similar to:		 PaperBLAST

Echvi_1472: UDP-glucose 4-epimerase (EC 5.1.3.2) from Echinicola vietnamensis

 60% id,
100% cov

A0A0H2URG4: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Streptococcus pneumoniae

 51% id,
99% cov

galE / P55180: UDP-glucose 4-epimerase (EC 5.1.3.7; EC 5.1.3.2) from Bacillus subtilis

 51% id,
96% cov

More...

pseB BD749_RS17655 BD749_3597 WP_101446957.1: UDP-N-acetylglucosamine 4,6-dehydratase (inverting)
is similar to:		 PaperBLAST

CAPD_RICPR / Q9ZDJ5: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Rickettsia prowazekii

 40% id,
95% cov

V5RBP5: UDP-glucose 4-epimerase (EC 5.1.3.2) from Acinetobacter baumannii

 40% id,
95% cov

Q5D9E1: UDP-glucose 4-epimerase (EC 5.1.3.2) from Schistosoma japonicum

 26% id,
83% cov

More...

BD749_RS15055 BD749_3073 WP_101445862.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

Q9WYX9: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Thermotoga maritima

 37% id,
99% cov

GALE_MYCS2 / A0R5C5: UDP-glucose 4-epimerase; UDP-galactose 4-epimerase; Uridine diphosphate galactose 4-epimerase; EC 5.1.3.2 from Mycolicibacterium smegmatis

 35% id,
99% cov

galE1 / P9WN67: UDP-galactose/glucose 4-epimerase subunit (EC 5.1.3.7; EC 5.1.3.2) from Mycobacterium tuberculosis
P9WN67: UDP-glucose 4-epimerase (EC 5.1.3.2) from Mycobacterium tuberculosis

 35% id,
98% cov

More...

BD749_RS02245 BD749_0457 WP_218972538.1: NAD-dependent epimerase/dehydratase family protein
is similar to:		 PaperBLAST

Q9WYX9: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Thermotoga maritima

 37% id,
99% cov

F6DEY6: UDP-glucose 4-epimerase (EC 5.1.3.2) from Thermus thermophilus

 33% id,
96% cov

galE / P55180: UDP-glucose 4-epimerase (EC 5.1.3.7; EC 5.1.3.2) from Bacillus subtilis

 31% id,
96% cov

More...

BD749_RS15840 BD749_3233 WP_101446135.1: UDP-glucuronic acid decarboxylase family protein
is similar to:		 PaperBLAST

GALE_MYCS2 / A0R5C5: UDP-glucose 4-epimerase; UDP-galactose 4-epimerase; Uridine diphosphate galactose 4-epimerase; EC 5.1.3.2 from Mycolicibacterium smegmatis

 34% id,
100% cov

Q9WYX9: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Thermotoga maritima

 34% id,
100% cov

O73960: UDP-glucose 4-epimerase (EC 5.1.3.2) from Pyrococcus horikoshii

 32% id,
100% cov

More...

BD749_RS15050 BD749_3072 WP_101445861.1: NAD-dependent 4,6-dehydratase LegB
is similar to:		 PaperBLAST

O73960: UDP-glucose 4-epimerase (EC 5.1.3.2) from Pyrococcus horikoshii

 34% id,
97% cov

GALE_MYCS2 / A0R5C5: UDP-glucose 4-epimerase; UDP-galactose 4-epimerase; Uridine diphosphate galactose 4-epimerase; EC 5.1.3.2 from Mycolicibacterium smegmatis

 33% id,
100% cov

galE1 / P9WN67: UDP-galactose/glucose 4-epimerase subunit (EC 5.1.3.7; EC 5.1.3.2) from Mycobacterium tuberculosis
P9WN67: UDP-glucose 4-epimerase (EC 5.1.3.2) from Mycobacterium tuberculosis

 32% id,
99% cov

More...

rfbB BD749_RS10900 BD749_2225 WP_101444363.1: dTDP-glucose 4,6-dehydratase
is similar to:		 PaperBLAST

F6DEY6: UDP-glucose 4-epimerase (EC 5.1.3.2) from Thermus thermophilus

 33% id,
99% cov

galE1 / P9WN67: UDP-galactose/glucose 4-epimerase subunit (EC 5.1.3.7; EC 5.1.3.2) from Mycobacterium tuberculosis
P9WN67: UDP-glucose 4-epimerase (EC 5.1.3.2) from Mycobacterium tuberculosis

 32% id,
98% cov

Q9WYX9: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Thermotoga maritima

 30% id,
98% cov

More...

BD749_RS14930 BD749_3048 WP_101445825.1: nucleoside-diphosphate sugar epimerase/dehydratase
is similar to:		 PaperBLAST

V5RBP5: UDP-glucose 4-epimerase (EC 5.1.3.2) from Acinetobacter baumannii

 34% id,
93% cov

CAPD_RICPR / Q9ZDJ5: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Rickettsia prowazekii

 33% id,
95% cov

Q9WYX9: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Thermotoga maritima

 24% id,
87% cov

More...

BD749_RS00560 BD749_0115 WP_101442441.1: NAD-dependent epimerase/dehydratase family protein
is similar to:		 PaperBLAST

Q9WYX9: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Thermotoga maritima

 28% id,
98% cov

GALE_CAEEL / Q564Q1: UDP-glucose 4-epimerase; Galactowaldenase; UDP-N-acetylgalactosamine 4-epimerase; UDP-GalNAc 4-epimerase; UDP-N-acetylglucosamine 4-epimerase; UDP-GlcNAc 4-epimerase; UDP-galactose 4-epimerase; EC 5.1.3.2; EC 5.1.3.7 from Caenorhabditis elegans

 28% id,
97% cov

O73960: UDP-glucose 4-epimerase (EC 5.1.3.2) from Pyrococcus horikoshii

 28% id,
97% cov

More...

rfaD BD749_RS06865 BD749_1405 WP_101443680.1: ADP-glyceromanno-heptose 6-epimerase
is similar to:		 PaperBLAST

Q9WYX9: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Thermotoga maritima

 27% id,
98% cov

gmd BD749_RS01480 BD749_0302 WP_101442610.1: GDP-mannose 4,6-dehydratase
is similar to:		 PaperBLAST

GALE_MYCS2 / A0R5C5: UDP-glucose 4-epimerase; UDP-galactose 4-epimerase; Uridine diphosphate galactose 4-epimerase; EC 5.1.3.2 from Mycolicibacterium smegmatis

 30% id,
85% cov

galE1 / P9WN67: UDP-galactose/glucose 4-epimerase subunit (EC 5.1.3.7; EC 5.1.3.2) from Mycobacterium tuberculosis
P9WN67: UDP-glucose 4-epimerase (EC 5.1.3.2) from Mycobacterium tuberculosis

 28% id,
82% cov

BD749_RS01475 BD749_0301 WP_262502986.1: GDP-L-fucose synthase
is similar to:		 PaperBLAST

GALE_MYCS2 / A0R5C5: UDP-glucose 4-epimerase; UDP-galactose 4-epimerase; Uridine diphosphate galactose 4-epimerase; EC 5.1.3.2 from Mycolicibacterium smegmatis

 26% id,
99% cov

galE1 / P9WN67: UDP-galactose/glucose 4-epimerase subunit (EC 5.1.3.7; EC 5.1.3.2) from Mycobacterium tuberculosis
P9WN67: UDP-glucose 4-epimerase (EC 5.1.3.2) from Mycobacterium tuberculosis

 26% id,
99% cov

Q9WYX9: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Thermotoga maritima

 25% id,
99% cov

More...

BD749_RS09450 BD749_1928 WP_101444123.1: NAD-dependent epimerase/dehydratase family protein
is similar to:		 PaperBLAST

F6DEY6: UDP-glucose 4-epimerase (EC 5.1.3.2) from Thermus thermophilus

 29% id,
86% cov

O73960: UDP-glucose 4-epimerase (EC 5.1.3.2) from Pyrococcus horikoshii

 24% id,
86% cov

GALE_NEIMC / P56986: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Neisseria meningitidis

 29% id,
47% cov

More...

BD749_RS02280 BD749_0464 WP_101442750.1: NAD-dependent epimerase/dehydratase family protein
is similar to:		 PaperBLAST

UGE5_ARATH / Q9SN58: UDP-glucose 4-epimerase 5; AtUGE5; UDP-galactose 4-epimerase 5; EC 5.1.3.2 from Arabidopsis thaliana
Q9SN58: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-arabinose 4-epimerase (EC 5.1.3.5) from Arabidopsis thaliana

 26% id,
93% cov

GALE_CAEEL / Q564Q1: UDP-glucose 4-epimerase; Galactowaldenase; UDP-N-acetylgalactosamine 4-epimerase; UDP-GalNAc 4-epimerase; UDP-N-acetylglucosamine 4-epimerase; UDP-GlcNAc 4-epimerase; UDP-galactose 4-epimerase; EC 5.1.3.2; EC 5.1.3.7 from Caenorhabditis elegans

 25% id,
94% cov

A3MUJ4: UDP-glucose 4-epimerase (EC 5.1.3.2) from Pyrobaculum calidifontis

 33% id,
38% cov

More...

BD749_RS05445 BD749_1118 WP_101443325.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

GALE_CAEEL / Q564Q1: UDP-glucose 4-epimerase; Galactowaldenase; UDP-N-acetylgalactosamine 4-epimerase; UDP-GalNAc 4-epimerase; UDP-N-acetylglucosamine 4-epimerase; UDP-GlcNAc 4-epimerase; UDP-galactose 4-epimerase; EC 5.1.3.2; EC 5.1.3.7 from Caenorhabditis elegans

 28% id,
86% cov

Echvi_1472: UDP-glucose 4-epimerase (EC 5.1.3.2) from Echinicola vietnamensis

 27% id,
88% cov

A3MUJ4: UDP-glucose 4-epimerase (EC 5.1.3.2) from Pyrobaculum calidifontis

 27% id,
86% cov

More...

BD749_RS05115 BD749_1051 WP_101443267.1: aldose epimerase family protein
is similar to:		 PaperBLAST

Q9HDU3: UDP-glucose 4-epimerase (EC 5.1.3.2) from Schizosaccharomyces pombe

 31% id,
46% cov

P04397: UDP-glucose 4-epimerase (EC 5.1.3.2) from Saccharomyces cerevisiae

 27% id,
51% cov

BD749_RS08250 BD749_1681 WP_101443928.1: TIGR01777 family oxidoreductase
is similar to:		 PaperBLAST

Q5D9E1: UDP-glucose 4-epimerase (EC 5.1.3.2) from Schistosoma japonicum

 28% id,
41% cov

UGE1_SCHPO / Q9Y7X5: UDP-glucose 4-epimerase uge1; Galactowaldenase; EC 5.1.3.2 from Schizosaccharomyces pombe
Q9Y7X5: UDP-glucose 4-epimerase (EC 5.1.3.2) from Schizosaccharomyces pombe

 28% id,
37% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 17 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1057927-1058754 (frame -3) on NZ_PJMU01000002.1 Pontibacter ramchanderi strain LP43 Ga0116985_102, whole genome shotgun sequence
is similar to:		 PaperBLAST

UGE1_SCHPO / Q9Y7X5: UDP-glucose 4-epimerase uge1; Galactowaldenase; EC 5.1.3.2 from Schizosaccharomyces pombe
Q9Y7X5: UDP-glucose 4-epimerase (EC 5.1.3.2) from Schizosaccharomyces pombe
Also see hits to annotated proteins above

 21% id,
58% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory