Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Pontibacter ramchanderi LP43 (GCF_002846395.1)

Found 51 curated entries in PaperBLAST's database that match '5.4.2.2' as complete word(s).

These curated entries have 35 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pontibacter ramchanderi LP43, or try another query

BD749_RS13885 BD749_2839 WP_101445311.1: phospho-sugar mutase is similar to:	PaperBLAST
PGCA_BACSU / P18159: Phosphoglucomutase; PGM; Alpha-phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Bacillus subtilis pgcA / P18159: α-phosphoglucomutase (EC 5.4.2.2) from Bacillus subtilis	46% id, 94% cov
PGCA_STAA8 / Q2FVC1: Phosphoglucomutase; PGM; Alpha-phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Staphylococcus aureus	37% id, 97% cov
C6L2F4: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Toxoplasma gondii	32% id, 97% cov
PGM2_HUMAN / Q96G03: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-2; EC 5.4.2.7; EC 5.4.2.2 from Homo sapiens PGM2 / Q96G03: phosphoglucomutase-2 (EC 5.4.2.2; EC 5.4.2.7) from Homo sapiens	32% id, 95% cov
PGM2_MOUSE / Q7TSV4: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-1; Phosphoglucomutase-2; PGM 2; EC 5.4.2.7; EC 5.4.2.2 from Mus musculus	32% id, 94% cov
PGMMM_THEKO / Q68BJ6: Phosphoglucomutase/phosphomannomutase; PGM/PMM; EC 5.4.2.2; EC 5.4.2.8 from Thermococcus kodakarensis	28% id, 89% cov
Q980S1: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2); phosphomannomutase (EC 5.4.2.8) from Saccharolobus solfataricus	24% id, 99% cov
Q8PGN7: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Xanthomonas citri	26% id, 72% cov
M1T754: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2); phosphomannomutase (EC 5.4.2.8) from Sphingomonas sanxanigenens	25% id, 75% cov
ALGC_PSEAE / P26276: Phosphomannomutase/phosphoglucomutase; PMM / PGM; EC 5.4.2.2; EC 5.4.2.8 from Pseudomonas aeruginosa algC / P26276: phosphomannomutase (EC 5.4.2.2; EC 5.4.2.8) from Pseudomonas aeruginosa	25% id, 50% cov
More...

glmM BD749_RS18370 BD749_3740 WP_101447241.1: phosphoglucosamine mutase is similar to:	PaperBLAST
PGMMM_THEKO / Q68BJ6: Phosphoglucomutase/phosphomannomutase; PGM/PMM; EC 5.4.2.2; EC 5.4.2.8 from Thermococcus kodakarensis	36% id, 96% cov
Q980S1: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2); phosphomannomutase (EC 5.4.2.8) from Saccharolobus solfataricus	30% id, 100% cov
M1T754: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2); phosphomannomutase (EC 5.4.2.8) from Sphingomonas sanxanigenens	28% id, 94% cov
ALGC_PSEAE / P26276: Phosphomannomutase/phosphoglucomutase; PMM / PGM; EC 5.4.2.2; EC 5.4.2.8 from Pseudomonas aeruginosa algC / P26276: phosphomannomutase (EC 5.4.2.2; EC 5.4.2.8) from Pseudomonas aeruginosa	28% id, 95% cov
Q8PGN7: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Xanthomonas citri	27% id, 97% cov
PGCA_STAA8 / Q2FVC1: Phosphoglucomutase; PGM; Alpha-phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Staphylococcus aureus	22% id, 82% cov
PGM1_RABIT / P00949: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Oryctolagus cuniculus	25% id, 63% cov
PGM1_HUMAN / P36871: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Homo sapiens PGM1 / P36871: phosphoglucomutase-1 (EC 5.4.2.2) from Homo sapiens P36871: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Homo sapiens	25% id, 63% cov
PGM1_RAT / P38652: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Rattus norvegicus	25% id, 62% cov
PGMP_ARATH / Q9SCY0: Phosphoglucomutase, chloroplastic; PGM; Glucose phosphomutase; Protein REDUCED GRAVITROPIC 2; EC 5.4.2.2 from Arabidopsis thaliana PGM / Q9SCY0: phosphoglucomutase (α-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Arabidopsis thaliana Q9SCY0: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Arabidopsis thaliana	22% id, 70% cov
A0A2H5BEG8: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Ganoderma lucidum	23% id, 62% cov
PGCA_BACSU / P18159: Phosphoglucomutase; PGM; Alpha-phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Bacillus subtilis pgcA / P18159: α-phosphoglucomutase (EC 5.4.2.2) from Bacillus subtilis	26% id, 48% cov
PGMP1_MARPO / A0A2R6W0K6: Phosphoglucomutase 1, chloroplastic; MpPGM1; Glucose phosphomutase; EC 5.4.2.2 from Marchantia polymorpha	22% id, 51% cov
PGM2_MOUSE / Q7TSV4: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-1; Phosphoglucomutase-2; PGM 2; EC 5.4.2.7; EC 5.4.2.2 from Mus musculus	27% id, 20% cov
PGM2_HUMAN / Q96G03: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-2; EC 5.4.2.7; EC 5.4.2.2 from Homo sapiens PGM2 / Q96G03: phosphoglucomutase-2 (EC 5.4.2.2; EC 5.4.2.7) from Homo sapiens	30% id, 18% cov
PGM_DROME / Q9VUY9: Phosphoglucomutase; PGM; Glucose phosphomutase; EC 5.4.2.2 from Drosophila melanogaster	34% id, 14% cov
PGM_EMENI / Q9P931: Phosphoglucomutase; PGM; Glucose phosphomutase; EC 5.4.2.2 from Emericella nidulans pgmB: phosphoglucomutase; EC 5.4.2.2 from Emericella nidulans	34% id, 12% cov
A8N8Z1: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Coprinopsis cinerea	31% id, 11% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory