Curated BLAST for Genomes

 

Curated BLAST

Searching in Pontibacter ramchanderi LP43 (GCF_002846395.1)

Found 3 curated entries in PaperBLAST's database that match '6.3.2.60' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pontibacter ramchanderi LP43, or try another query

cphA BD749_RS17935 BD749_3653 WP_101447061.1: cyanophycin synthetase
is similar to:
PaperBLAST

Q5JFW0: lysyltransferase (EC 2.3.2.3); [amino group carrier protein]-L-2-aminoadipate ligase (EC 6.3.2.43); glutamate---[amino group carrier protein] ligase (EC 6.3.2.60) from Thermococcus kodakarensis

28% id,
62% cov

argX / Q4J8E7: glutamate--LysW ligase monomer (EC 6.3.2.60) from Sulfolobus acidocaldarius
Q4J8E7: glutamate---[amino group carrier protein] ligase (EC 6.3.2.60) from Sulfolobus acidocaldarius

25% id,
64% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory