Curated BLAST for Genomes

 

Curated BLAST

Searching in Pontibacter ramchanderi LP43 (GCF_002846395.1)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pontibacter ramchanderi LP43, or try another query

BD749_RS18475 BD749_3761 WP_101447279.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

46% id,
99% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

42% id,
98% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

36% id,
99% cov

BD749_RS02820 BD749_0574 WP_101442850.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

47% id,
96% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

45% id,
95% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

38% id,
100% cov

guaA BD749_RS17590 BD749_3584 WP_101446931.1: glutamine-hydrolyzing GMP synthase
is similar to:
PaperBLAST

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

29% id,
99% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

28% id,
94% cov

carA BD749_RS09045 BD749_1843 WP_101444065.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

35% id,
72% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

25% id,
77% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory