Curated BLAST for Genomes

 

Curated BLAST

Searching in Halioglobus japonicus S1-36 (GCF_002869505.1)

Found 5 curated entries in PaperBLAST's database that match '1.2.1.20' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Halioglobus japonicus S1-36, or try another query

C0029_RS01440 C0029_01440 WP_084200632.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

64% id,
100% cov

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

63% id,
100% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

62% id,
100% cov

More...

C0029_RS01835 C0029_01835 WP_066048767.1: aldehyde dehydrogenase
is similar to:
PaperBLAST

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

39% id,
96% cov

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

38% id,
96% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

38% id,
96% cov

More...

C0029_RS09070 C0029_09060 WP_084199173.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

37% id,
97% cov

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

36% id,
96% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

36% id,
97% cov

More...

C0029_RS04065 C0029_04060 WP_084201181.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

36% id,
98% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

35% id,
97% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

35% id,
98% cov

More...

C0029_RS01630 C0029_01630 WP_102106082.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

36% id,
96% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

35% id,
97% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

34% id,
97% cov

More...

C0029_RS06995 C0029_06985 WP_102106210.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

34% id,
93% cov

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

33% id,
93% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

33% id,
93% cov

More...

C0029_RS03960 C0029_03955 WP_084200249.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

32% id,
92% cov

sad / P76149: succinate semialdehyde dehydrogenase (NAD(P)+) Sad (EC 1.2.1.24; EC 1.2.1.20) from Escherichia coli

32% id,
90% cov

davD / Q9I6M5: glutarate semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas aeruginosa

31% id,
92% cov

More...

putA C0029_RS02865 C0029_02865 WP_229801593.1: bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA
is similar to:
PaperBLAST

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

31% id,
95% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

32% id,
93% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

30% id,
93% cov

More...

C0029_RS09440 C0029_09430 WP_084199283.1: coniferyl aldehyde dehydrogenase
is similar to:
PaperBLAST

gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli

25% id,
99% cov

Q88RC0: glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas putida

28% id,
84% cov

PfGW456L13_495: Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) from Pseudomonas fluorescens

28% id,
84% cov

More...

C0029_RS03780 C0029_03775 WP_084200268.1: coniferyl aldehyde dehydrogenase
is similar to:
PaperBLAST

sad / P76149: succinate semialdehyde dehydrogenase (NAD(P)+) Sad (EC 1.2.1.24; EC 1.2.1.20) from Escherichia coli

29% id,
71% cov

C0029_RS09130 C0029_09120 WP_084199187.1: coniferyl aldehyde dehydrogenase
is similar to:
PaperBLAST

sad / P76149: succinate semialdehyde dehydrogenase (NAD(P)+) Sad (EC 1.2.1.24; EC 1.2.1.20) from Escherichia coli

24% id,
87% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory