Searching in Halioglobus japonicus S1-36 (GCF_002869505.1)
Found 6 curated entries in PaperBLAST's database that match '5.1.1.5' as complete word(s).
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Halioglobus japonicus S1-36, or try another query
alr C0029_RS02215 C0029_02215 WP_084200507.1: alanine racemase is similar to: | PaperBLAST |
LYSR_OENOB / Q04HB7: Lysine racemase; EC 5.1.1.5 from Oenococcus oeni | 27% id, 98% cov |
LYR_PROMI / M4GGR9: Lysine racemase; EC 5.1.1.5 from Proteus mirabilis | 28% id, 88% cov |
argC C0029_RS15255 C0029_15245 WP_084197780.1: N-acetyl-gamma-glutamyl-phosphate reductase is similar to: | PaperBLAST |
C7ACH5: lysine racemase (EC 5.1.1.5) from uncultured bacterium | 40% id, 50% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
482878-484041 (frame -1) on NZ_PKUR01000001.1 Halioglobus japonicus strain S1-36 contig1, whole genome shotgun sequence is similar to: | PaperBLAST |
LYSR_OENOB / Q04HB7: Lysine racemase; EC 5.1.1.5 from Oenococcus oeni | 27% id, 100% cov |
Lawrence Berkeley National Laboratory