Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhodococcus qingshengii djl-6-2 (GCF_002893965.1)

Found 1 curated entries in PaperBLAST's database that match '1.3.99.10' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 44 relevant proteins in Rhodococcus qingshengii djl-6-2, or try another query

C1M55_RS26505 C1M55_26505 WP_007730036.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

40% id,
86% cov

C1M55_RS25280 C1M55_25280 WP_003939784.1: acyl-CoA dehydrogenase
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

39% id,
87% cov

C1M55_RS25880 C1M55_25880 WP_007732726.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

37% id,
89% cov

C1M55_RS09270 C1M55_09270 WP_007730190.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

36% id,
89% cov

C1M55_RS14010 C1M55_14010 WP_007735194.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

36% id,
87% cov

C1M55_RS26160 C1M55_26160 WP_003940468.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

35% id,
87% cov

C1M55_RS26255 C1M55_26255 WP_050654634.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

34% id,
89% cov

C1M55_RS26180 C1M55_26180 WP_003940617.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

34% id,
87% cov

C1M55_RS01070 C1M55_01070 WP_050656840.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

33% id,
91% cov

C1M55_RS09530 C1M55_09530 WP_050655857.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

34% id,
88% cov

C1M55_RS08875 C1M55_08875 WP_007728404.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

33% id,
86% cov

C1M55_RS19625 C1M55_19625 WP_007726145.1: isobutyryl-CoA dehydrogenase
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

33% id,
87% cov

C1M55_RS27785 C1M55_27785 WP_007730792.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

33% id,
87% cov

C1M55_RS24690 C1M55_24690 WP_003939770.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

32% id,
89% cov

C1M55_RS26275 C1M55_26275 WP_050654604.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

32% id,
87% cov

C1M55_RS23440 C1M55_23440 WP_047271188.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

30% id,
89% cov

C1M55_RS24645 C1M55_24645 WP_007733810.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

32% id,
84% cov

C1M55_RS26425 C1M55_26425 WP_003940162.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

31% id,
87% cov

C1M55_RS20160 C1M55_20160 WP_030536908.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

28% id,
88% cov

C1M55_RS25340 C1M55_25340 WP_050656416.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

28% id,
87% cov

C1M55_RS24950 C1M55_24950 WP_050654809.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

31% id,
80% cov

C1M55_RS00765 C1M55_00765 WP_042453232.1: acyl-CoA dehydrogenase
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

28% id,
87% cov

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

27% id,
85% cov

C1M55_RS05915 C1M55_05915 WP_007734683.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

30% id,
79% cov

C1M55_RS11405 C1M55_11405 WP_050655137.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

28% id,
85% cov

C1M55_RS04745 C1M55_04745 WP_003945878.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

28% id,
86% cov

C1M55_RS04740 C1M55_04740 WP_054188082.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

27% id,
88% cov

C1M55_RS04400 C1M55_04400 WP_007734181.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

27% id,
87% cov

C1M55_RS03915 C1M55_03915 WP_007734000.1: acyl-CoA dehydrogenase
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

27% id,
85% cov

C1M55_RS25650 C1M55_25650 WP_003940442.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

27% id,
86% cov

C1M55_RS02275 C1M55_02275 WP_076948723.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

28% id,
82% cov

C1M55_RS11400 C1M55_11400 WP_003942363.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

26% id,
86% cov

C1M55_RS25345 C1M55_25345 WP_050656415.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

25% id,
88% cov

C1M55_RS03925 C1M55_03925 WP_050657066.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

25% id,
87% cov

C1M55_RS05575 C1M55_05575 WP_007734578.1: acyl-CoA dehydrogenase
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

26% id,
81% cov

C1M55_RS25640 C1M55_25640 WP_030537002.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

24% id,
85% cov

C1M55_RS29575 C1M55_29575 WP_050654947.1: acyl-CoA dehydrogenase
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

26% id,
77% cov

C1M55_RS20165 C1M55_20165 WP_050656663.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

27% id,
76% cov

C1M55_RS30275 C1M55_30275 WP_050655943.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

29% id,
67% cov

C1M55_RS30290 C1M55_30290 WP_050655941.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

28% id,
67% cov

C1M55_RS04415 C1M55_04415 WP_050655738.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

27% id,
66% cov

C1M55_RS30655 C1M55_30655 WP_050655907.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

28% id,
64% cov

C1M55_RS02265 C1M55_02265 WP_076948721.1: acyl-CoA dehydrogenase
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

30% id,
60% cov

C1M55_RS25765 C1M55_25765 WP_050656596.1: acyl-CoA dehydrogenase
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

31% id,
51% cov

C1M55_RS27650 C1M55_27650 WP_076948641.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

27% id,
55% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 44 reading frames. Except for 8 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

5391647-5392960 (frame +2) on NZ_CP025959.1 Rhodococcus qingshengii strain djl-6-2 chromosome 1, complete sequence
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans
Also see hits to annotated proteins above

37% id,
95% cov

2977005-2978258 (frame +3) on NZ_CP025959.1 Rhodococcus qingshengii strain djl-6-2 chromosome 1, complete sequence
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans
Also see hits to annotated proteins above

34% id,
95% cov

233997-235340 (frame +3) on NZ_CP025959.1 Rhodococcus qingshengii strain djl-6-2 chromosome 1, complete sequence
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans
Also see hits to annotated proteins above

33% id,
96% cov

4364527-4365816 (frame -2) on NZ_CP025959.1 Rhodococcus qingshengii strain djl-6-2 chromosome 1, complete sequence
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans
Also see hits to annotated proteins above

28% id,
98% cov

842703-844160 (frame +3) on NZ_CP025959.1 Rhodococcus qingshengii strain djl-6-2 chromosome 1, complete sequence
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans
Also see hits to annotated proteins above

26% id,
93% cov

5467522-5468733 (frame -2) on NZ_CP025959.1 Rhodococcus qingshengii strain djl-6-2 chromosome 1, complete sequence
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans
Also see hits to annotated proteins above

26% id,
92% cov

5405428-5406885 (frame -2) on NZ_CP025959.1 Rhodococcus qingshengii strain djl-6-2 chromosome 1, complete sequence
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans
Also see hits to annotated proteins above

24% id,
97% cov

5864585-5865997 (frame -1) on NZ_CP025959.1 Rhodococcus qingshengii strain djl-6-2 chromosome 1, complete sequence
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans
Also see hits to annotated proteins above

26% id,
67% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory