Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhodococcus qingshengii djl-6-2 (GCF_002893965.1)

Found 9 curated entries in PaperBLAST's database that match '2.7.1.144' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Rhodococcus qingshengii djl-6-2, or try another query

C1M55_RS12465 C1M55_12465 WP_019747919.1: ATP-dependent 6-phosphofructokinase
is similar to:
PaperBLAST

PFKA_MYCTU / P9WID7: ATP-dependent 6-phosphofructokinase; ATP-PFK; Phosphofructokinase; Phosphofructokinase A; Phosphohexokinase; Tagatose-6-phosphate kinase; EC 2.7.1.11; EC 2.7.1.144 from Mycobacterium tuberculosis

78% id,
100% cov

pfkA / P0A797: 6-phosphofructokinase subunit (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli

42% id,
94% cov

C1M55_RS13990 C1M55_13990 WP_007735190.1: 1-phosphofructokinase family hexose kinase
is similar to:
PaperBLAST

PfkB / b1723: 6-phosphofructokinase 2 (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli
pfkB / P06999: 6-phosphofructokinase 2 (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli

34% id,
94% cov

LACC_LACLL / P23391: Tagatose-6-phosphate kinase; Phosphotagatokinase; EC 2.7.1.144 from Lactococcus lactis

31% id,
94% cov

PFKB_MYCTO / P9WID2: ATP-dependent 6-phosphofructokinase isozyme 2; ATP-PFK 2; Phosphofructokinase 2; Phosphofructokinase B; Phosphohexokinase 2; Tagatose-6-phosphate kinase; EC 2.7.1.11; EC 2.7.1.144 from Mycobacterium tuberculosis
PFKB_MYCTU / P9WID3: ATP-dependent 6-phosphofructokinase isozyme 2; ATP-PFK 2; Phosphofructokinase 2; Phosphofructokinase B; Phosphohexokinase 2; Tagatose-6-phosphate kinase; EC 2.7.1.11; EC 2.7.1.144 from Mycobacterium tuberculosis

30% id,
88% cov

iolC C1M55_RS10205 C1M55_10205 WP_172933431.1: 5-dehydro-2-deoxygluconokinase
is similar to:
PaperBLAST

PFKB_MYCTO / P9WID2: ATP-dependent 6-phosphofructokinase isozyme 2; ATP-PFK 2; Phosphofructokinase 2; Phosphofructokinase B; Phosphohexokinase 2; Tagatose-6-phosphate kinase; EC 2.7.1.11; EC 2.7.1.144 from Mycobacterium tuberculosis
PFKB_MYCTU / P9WID3: ATP-dependent 6-phosphofructokinase isozyme 2; ATP-PFK 2; Phosphofructokinase 2; Phosphofructokinase B; Phosphohexokinase 2; Tagatose-6-phosphate kinase; EC 2.7.1.11; EC 2.7.1.144 from Mycobacterium tuberculosis

27% id,
80% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory