Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhodococcus qingshengii djl-6-2 (GCF_002893965.1)

Found 37 curated entries in PaperBLAST's database that match '2.7.1.30' as complete word(s).

These curated entries have 29 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Rhodococcus qingshengii djl-6-2, or try another query

glpK C1M55_RS23175 C1M55_23175 WP_007733474.1: glycerol kinase GlpK
is similar to:
PaperBLAST

D0VZG4: glycerol kinase (EC 2.7.1.30) from Cellulomonas sp.

73% id,
99% cov

P9WPK1: glycerol kinase (EC 2.7.1.30) from Mycobacterium tuberculosis

65% id,
97% cov

GLPK_THETH / O66131: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermus thermophilus

54% id,
99% cov

More...

glpK C1M55_RS10610 C1M55_10610 WP_076949000.1: glycerol kinase GlpK
is similar to:
PaperBLAST

D0VZG4: glycerol kinase (EC 2.7.1.30) from Cellulomonas sp.

70% id,
99% cov

P9WPK1: glycerol kinase (EC 2.7.1.30) from Mycobacterium tuberculosis

63% id,
97% cov

A6TFR2: glycerol kinase (EC 2.7.1.30) from Klebsiella pneumoniae

55% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory