Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhodococcus qingshengii djl-6-2 (GCF_002893965.1)

Found 11 curated entries in PaperBLAST's database that match '5.3.1.30' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Rhodococcus qingshengii djl-6-2, or try another query

iolB C1M55_RS10195 C1M55_10195 WP_003940746.1: 5-deoxy-glucuronate isomerase
is similar to:
PaperBLAST

SMc00432: 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Sinorhizobium meliloti

37% id,
92% cov

BWI76_RS03075: 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Klebsiella michiganensis

37% id,
92% cov

IOLB_BACSU / P42413: 5-deoxy-glucuronate isomerase; 5DG isomerase; EC 5.3.1.30 from Bacillus subtilis
iolB / P42413: 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) from Bacillus subtilis
P42413: 5-deoxy-glucuronate isomerase (EC 5.3.1.30) from Bacillus subtilis

37% id,
91% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory