Curated BLAST for Genomes

 

Curated BLAST

Searching in Chryseobacterium viscerum 687B-08 (GCF_002899945.2)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Chryseobacterium viscerum 687B-08, or try another query

C1634_RS03565 C1634_003565 WP_103231942.1: ROK family protein
is similar to:
PaperBLAST

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

36% id,
98% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

34% id,
98% cov

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

34% id,
97% cov

More...

C1634_RS17380 C1634_017380 WP_103233526.1: glucokinase
is similar to:
PaperBLAST

A0A3G4RI75: glucokinase (EC 2.7.1.2) from Methylomonas methanica

33% id,
98% cov

G4T1H4: glucokinase (EC 2.7.1.2) from Methylotuvimicrobium alcaliphilum

32% id,
93% cov

Dshi_1655: glucokinase (EC 2.7.1.2) from Dinoroseobacter shibae

26% id,
87% cov

C1634_RS01540 C1634_001540 WP_103231109.1: ROK family protein
is similar to:
PaperBLAST

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

32% id,
43% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory