Curated BLAST for Genomes

 

Curated BLAST

Searching in Pontimonas salivibrio CL-TW6 (GCF_002950575.1)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Pontimonas salivibrio CL-TW6, or try another query

C3B54_RS04510 C3B54_11912 WP_104913435.1: ROK family protein
is similar to:
PaperBLAST

PPGK_MYCTA / A5U654: Polyphosphate glucokinase; Poly(P) glucokinase; ATP-dependent glucokinase; Polyphosphate--glucose phosphotransferase; EC 2.7.1.63; EC 2.7.1.2 from Mycobacterium tuberculosis
PPGK_MYCTU / P9WIN1: Polyphosphate glucokinase; Poly(P) glucokinase; ATP-dependent glucokinase; Polyphosphate--glucose phosphotransferase; EC 2.7.1.63; EC 2.7.1.2 from Mycobacterium tuberculosis

43% id,
91% cov

C3B54_RS04755 C3B54_11963 WP_158665540.1: ROK family protein
is similar to:
PaperBLAST

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

36% id,
98% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

35% id,
99% cov

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

33% id,
98% cov

More...

C3B54_RS05730 C3B54_111162 WP_104913646.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

28% id,
97% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

29% id,
94% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

27% id,
97% cov

More...

C3B54_RS08440 C3B54_111724 WP_104914105.1: galactokinase family protein
is similar to:
PaperBLAST

B1KDE7: glucokinase (EC 2.7.1.2) from Shewanella woodyi

27% id,
96% cov

B1KRG2: glucokinase (EC 2.7.1.2) from Shewanella woodyi

28% id,
89% cov

B1KD89: glucokinase (EC 2.7.1.2) from Shewanella woodyi

27% id,
89% cov

C3B54_RS06150 C3B54_111251 WP_104913714.1: FGGY family carbohydrate kinase
is similar to:
PaperBLAST

GLK_PYRCJ / A3MUZ0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Pyrobaculum calidifontis
A3MUZ0: glucokinase (EC 2.7.1.2) from Pyrobaculum calidifontis

45% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory