Curated BLAST for Genomes

 

Curated BLAST

Searching in Phyllobacterium endophyticum PEPV15 (GCF_003010935.1)

Found 31 curated entries in PaperBLAST's database that match '2.6.1.52' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Phyllobacterium endophyticum PEPV15, or try another query

CU100_RS23855 CU100_23870 WP_106719128.1: phosphoserine transaminase
is similar to:
PaperBLAST

serC / Q8TNI1: phosphoserine aminotransferase monomer (EC 2.6.1.52; EC 2.6.1.1) from Methanosarcina acetivorans

62% id,
100% cov

SERC_METBF / P52878: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Methanosarcina barkeri
P52878: phosphoserine transaminase (EC 2.6.1.52) from Methanosarcina barkeri

62% id,
100% cov

SERC_HUMAN / Q9Y617: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Homo sapiens
PSAT1 / Q9Y617: Phosphoserine aminotransferase (EC 2.6.1.52) from Homo sapiens
Q9Y617: glycine transaminase (EC 2.6.1.4); phosphoserine transaminase (EC 2.6.1.52) from Homo sapiens

25% id,
69% cov

CU100_RS06990 CU100_07015 WP_245418933.1: alanine--glyoxylate aminotransferase family protein
is similar to:
PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

37% id,
92% cov

serC / P74281: serine—glyoxylate transaminase (EC 2.6.1.52) from Synechocystis sp.
P74281: phosphoserine transaminase (EC 2.6.1.52) from Synechocystis sp.

28% id,
93% cov

CU100_RS15700 CU100_15730 WP_106717997.1: alanine--glyoxylate aminotransferase family protein
is similar to:
PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

32% id,
97% cov

serC / P74281: serine—glyoxylate transaminase (EC 2.6.1.52) from Synechocystis sp.
P74281: phosphoserine transaminase (EC 2.6.1.52) from Synechocystis sp.

27% id,
98% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory