Curated BLAST for Genomes

 

Curated BLAST

Searching in Phyllobacterium endophyticum PEPV15 (GCF_003010935.1)

Found 48 curated entries in PaperBLAST's database that match '4.1.3.1' as complete word(s).

These curated entries have 36 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Phyllobacterium endophyticum PEPV15, or try another query

aceA CU100_RS05550 CU100_05565 WP_106715487.1: isocitrate lyase
is similar to:
PaperBLAST

ACEA1_MYCBO / P0A5H4: Isocitrate lyase 1; ICL1; Isocitrase; Isocitratase; EC 4.1.3.1 from Mycobacterium bovis
ACEA1_MYCTE / H8EVV4: Isocitrate lyase 1; ICL1; Isocitrase; Isocitratase; Methylisocitrate lyase; MICA; EC 4.1.3.1; EC 4.1.3.30 from Mycobacterium tuberculosis
ACEA1_MYCTO / P9WKK6: Isocitrate lyase 1; ICL1; Isocitrase; Isocitratase; Methylisocitrate lyase; MICA; EC 4.1.3.1; EC 4.1.3.30 from Mycobacterium tuberculosis
ACEA_MYCTU / P9WKK7: Isocitrate lyase; ICL; Isocitrase; Isocitratase; EC 4.1.3.1 from Mycobacterium tuberculosis
icl / P9WKK7: isocitrate lyase subunit (EC 4.1.3.1) from Mycobacterium tuberculosis
P9WKK7: isocitrate lyase (EC 4.1.3.1) from Mycobacterium tuberculosis

67% id,
95% cov

A0A3S5YB92: isocitrate lyase (EC 4.1.3.1) from Rhodococcus hoagii

65% id,
95% cov

Q8RPZ0: isocitrate lyase (EC 4.1.3.1) from Streptomyces clavuligerus

66% id,
94% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory