Searching in Phyllobacterium brassicacearum STM 196 (GCF_003010955.1)
Found 18 curated entries in PaperBLAST's database that match '2.1.1.13' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Phyllobacterium brassicacearum STM 196, or try another query
CU102_RS06090 CU102_06100 WP_106710133.1: B12-binding domain-containing protein is similar to: | PaperBLAST |
PGA1_c13350: Methionine synthase component, B12 binding and B12-binding cap domains (EC:2.1.1.13) from Phaeobacter inhibens | 80% id, 98% cov |
Q9WYA5: methionine synthase (EC 2.1.1.13) from Thermotoga maritima | 34% id, 27% cov |
DVU1585: Methionine synthase (cobalamin-dependent) (EC 2.1.1.13) from Desulfovibrio vulgaris | 36% id, 24% cov |
metH CU102_RS21440 CU102_21435 WP_106713177.1: methionine synthase is similar to: | PaperBLAST |
METH_ECOLI / P13009: Methionine synthase; 5-methyltetrahydrofolate--homocysteine methyltransferase; Methionine synthase, vitamin-B12-dependent; MS; EC 2.1.1.13 from Escherichia coli | 63% id, 99% cov |
METH_RAT / Q9Z2Q4: Methionine synthase; MS; 5-methyltetrahydrofolate--homocysteine methyltransferase; Cobalamin-dependent methionine synthase; Vitamin-B12 dependent methionine synthase; EC 2.1.1.13 from Rattus norvegicus | 56% id, 99% cov |
METH_HUMAN / Q99707: Methionine synthase; MS; 5-methyltetrahydrofolate--homocysteine methyltransferase; Cobalamin-dependent methionine synthase; Vitamin-B12 dependent methionine synthase; EC 2.1.1.13 from Homo sapiens | 56% id, 99% cov |
CU102_RS06130 CU102_06140 WP_245425250.1: ASKHA domain-containing protein is similar to: | PaperBLAST |
PGA1_c15200: ATP-dependent reduction of co(II)balamin (RamA-like) (EC:2.1.1.13) from Phaeobacter inhibens | 57% id, 96% cov |
CU102_RS06125 CU102_06135 WP_106710138.1: methyltetrahydrofolate cobalamin methyltransferase is similar to: | PaperBLAST |
PGA1_c16040: Methionine synthase component, pterin-binding domain (EC:2.1.1.13) from Phaeobacter inhibens | 74% id, 73% cov |
DvMF_0476: vitamin B12-dependent methionine synthase without a reactivation domain (EC 2.1.1.13) from Desulfovibrio vulgaris | 38% id, 37% cov |
Q9WYA5: methionine synthase (EC 2.1.1.13) from Thermotoga maritima | 41% id, 33% cov |
bmt CU102_RS06070 CU102_06080 WP_106710129.1: betaine--homocysteine S-methyltransferase is similar to: | PaperBLAST |
PGA1_c13370: Methionine synthase component, methyltransferase domain (EC:2.1.1.13) from Phaeobacter inhibens | 54% id, 99% cov |
DVU1585: Methionine synthase (cobalamin-dependent) (EC 2.1.1.13) from Desulfovibrio vulgaris | 37% id, 38% cov |
DvMF_0476: vitamin B12-dependent methionine synthase without a reactivation domain (EC 2.1.1.13) from Desulfovibrio vulgaris | 36% id, 35% cov |
CU102_RS06100 CU102_06110 WP_245425232.1: DUF1638 domain-containing protein is similar to: | PaperBLAST |
PGA1_c13340: Accessory protein for co(II)balamin reduction (DUF1638) (EC:2.1.1.13) from Phaeobacter inhibens | 55% id, 80% cov |
CU102_RS28645 CU102_28605 WP_106714394.1: homocysteine S-methyltransferase family protein is similar to: | PaperBLAST |
DvMF_0476: vitamin B12-dependent methionine synthase without a reactivation domain (EC 2.1.1.13) from Desulfovibrio vulgaris | 28% id, 35% cov |
DVU1585: Methionine synthase (cobalamin-dependent) (EC 2.1.1.13) from Desulfovibrio vulgaris | 27% id, 35% cov |
CU102_RS14875 CU102_14865 WP_245425352.1: adenylate/guanylate cyclase domain-containing protein is similar to: | PaperBLAST |
PGA1_c15200: ATP-dependent reduction of co(II)balamin (RamA-like) (EC:2.1.1.13) from Phaeobacter inhibens | 30% id, 14% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
193970-196114 (frame +2) on NZ_PGGO01000003.1 Phyllobacterium brassicacearum strain STM 196 NODE_3_length_393795_cov_52.8005, whole genome shotgun sequence is similar to: | PaperBLAST |
PGA1_c15200: ATP-dependent reduction of co(II)balamin (RamA-like) (EC:2.1.1.13) from Phaeobacter inhibens | 56% id, 100% cov |
Lawrence Berkeley National Laboratory