Curated BLAST for Genomes

 

Curated BLAST

Searching in Phyllobacterium brassicacearum STM 196 (GCF_003010955.1)

Found 64 curated entries in PaperBLAST's database that match '2.3.1.9' as complete word(s).

These curated entries have 52 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Phyllobacterium brassicacearum STM 196, or try another query

CU102_RS21705 CU102_21695 WP_106713191.1: acetyl-CoA C-acetyltransferase
is similar to:
PaperBLAST

THIL_RHIME / P50174: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Rhizobium meliloti
SMc03879: Acetyl-CoA acetyltransferase (EC 2.3.1.9) from Sinorhizobium meliloti

85% id,
99% cov

THIL_SHIZO / P07097: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Shinella zoogloeoides

82% id,
99% cov

PGA1_c03400: acetyl-CoA:acetyl-CoA C-acetyltransferase / acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase (EC 2.3.1.9; EC 2.3.1.16) from Phaeobacter inhibens

76% id,
100% cov

More...

pcaF CU102_RS10795 CU102_10805 WP_106711108.1: 3-oxoadipyl-CoA thiolase
is similar to:
PaperBLAST

AO356_21640: acetyl-CoA C-acetyltransferase [EC: 2.3.1.9] from Pseudomonas fluorescens

47% id,
100% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
P76461: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Escherichia coli

47% id,
100% cov

THIL_THIVI / P45363: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Thiocystis violacea

47% id,
99% cov

More...

CU102_RS14130 CU102_14115 WP_106711729.1: acetyl-CoA C-acetyltransferase
is similar to:
PaperBLAST

Q0KAI3: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Cupriavidus necator

41% id,
100% cov

THIL_ALLVD / P45369: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Allochromatium vinosum

40% id,
96% cov

THLA_CLOAB / P45359: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; CaTHL; EC 2.3.1.9 from Clostridium acetobutylicum
P45359: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Clostridium acetobutylicum

38% id,
100% cov

More...

CU102_RS00675 CU102_00670 WP_106709041.1: acetyl-CoA acetyltransferase
is similar to:
PaperBLAST

I3RA72: acetyl-CoA C-acetyltransferase (subunit 2/2) (EC 2.3.1.9) from Haloferax mediterranei

33% id,
100% cov

I3R3D1: acetyl-CoA C-acetyltransferase (subunit 2/2) (EC 2.3.1.9) from Haloferax mediterranei

30% id,
99% cov

THIOL_METTL / A0A384E138: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; EC 2.3.1.9 from Methanothermococcus thermolithotrophicus
A0A384E138: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Methanothermococcus thermolithotrophicus

32% id,
87% cov

More...

fabF CU102_RS15685 CU102_15675 WP_106712137.1: beta-ketoacyl-ACP synthase II
is similar to:
PaperBLAST

B1YB71: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Pyrobaculum neutrophilum

37% id,
24% cov

A4YEH9: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Metallosphaera sedula

44% id,
11% cov

THIL_ALLVD / P45369: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Allochromatium vinosum

36% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory