Curated BLAST for Genomes

 

Curated BLAST

Searching in Phyllobacterium brassicacearum STM 196 (GCF_003010955.1)

Found 103 curated entries in PaperBLAST's database that match '2.6.1.1' as complete word(s).

These curated entries have 76 distinct sequences.

Running ublast with E ≤ 0.01

Found 25 relevant proteins in Phyllobacterium brassicacearum STM 196, or try another query

CU102_RS07230 CU102_07235 WP_106710509.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

AAPAT_RHIME / Q02635: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.79 from Rhizobium meliloti
Q02635: aspartate transaminase (EC 2.6.1.1); aspartate-prephenate aminotransferase (EC 2.6.1.78); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Sinorhizobium meliloti

77% id,
100% cov

AAPAT_CERS1 / A3PMF8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Cereibacter sphaeroides

64% id,
100% cov

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti

55% id,
96% cov

More...

CU102_RS09420 CU102_09435 WP_106711050.1: bifunctional aspartate transaminase/aspartate 4-decarboxylase
is similar to:
PaperBLAST

ASDP_PSESP / Q53IZ1: Bifunctional aspartate aminotransferase and L-aspartate beta-decarboxylase; Aspartate 4-decarboxylase; Asd; AsdP; EC 2.6.1.1; EC 4.1.1.12 from Pseudomonas sp.

71% id,
98% cov

ASDA_COMTE / Q93QX0: Bifunctional aspartate aminotransferase and L-aspartate beta-decarboxylase; Aspartate 4-decarboxylase; ASD; AsdA; EC 2.6.1.1; EC 4.1.1.12 from Comamonas testosteroni

71% id,
98% cov

CU102_RS09935 CU102_09950 WP_106710939.1: phosphoserine transaminase
is similar to:
PaperBLAST

serC / Q8TNI1: phosphoserine aminotransferase monomer (EC 2.6.1.52; EC 2.6.1.1) from Methanosarcina acetivorans

62% id,
100% cov

CU102_RS03165 CU102_03170 WP_106709531.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

AAPAT_CERS1 / A3PMF8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Cereibacter sphaeroides

59% id,
99% cov

AAPAT_RHIME / Q02635: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.79 from Rhizobium meliloti
Q02635: aspartate transaminase (EC 2.6.1.1); aspartate-prephenate aminotransferase (EC 2.6.1.78); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Sinorhizobium meliloti

58% id,
99% cov

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti

57% id,
97% cov

More...

CU102_RS23675 CU102_23655 WP_106713543.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

AAPAT_CERS1 / A3PMF8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Cereibacter sphaeroides

55% id,
100% cov

AAPAT_RHIME / Q02635: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.79 from Rhizobium meliloti
Q02635: aspartate transaminase (EC 2.6.1.1); aspartate-prephenate aminotransferase (EC 2.6.1.78); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Sinorhizobium meliloti

54% id,
100% cov

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti

51% id,
96% cov

More...

CU102_RS01735 CU102_01735 WP_106709221.1: aminotransferase
is similar to:
PaperBLAST

ASPAT_MYCTU / O69689: Aspartate aminotransferase; AspAT; EC 2.6.1.1 from Mycobacterium tuberculosis
O69689: aspartate transaminase (EC 2.6.1.1) from Mycobacterium tuberculosis

51% id,
96% cov

ASPAT_CORGL / Q8NTR2: Aspartate aminotransferase; AspAT; EC 2.6.1.1 from Corynebacterium glutamicum
Q8NTR2: aspartate transaminase (EC 2.6.1.1) from Corynebacterium glutamicum

49% id,
97% cov

AAPAT_NITEU / Q82WA8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Nitrosomonas europaea

23% id,
45% cov

CU102_RS15250 CU102_15240 WP_106711968.1: bifunctional aspartate transaminase/aspartate 4-decarboxylase
is similar to:
PaperBLAST

ASDP_PSESP / Q53IZ1: Bifunctional aspartate aminotransferase and L-aspartate beta-decarboxylase; Aspartate 4-decarboxylase; Asd; AsdP; EC 2.6.1.1; EC 4.1.1.12 from Pseudomonas sp.

47% id,
99% cov

ASDA_COMTE / Q93QX0: Bifunctional aspartate aminotransferase and L-aspartate beta-decarboxylase; Aspartate 4-decarboxylase; ASD; AsdA; EC 2.6.1.1; EC 4.1.1.12 from Comamonas testosteroni

46% id,
97% cov

CU102_RS16215 CU102_16200 WP_106712150.1: LL-diaminopimelate aminotransferase
is similar to:
PaperBLAST

Q8YTF2: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

43% id,
94% cov

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

34% id,
100% cov

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

29% id,
99% cov

More...

CU102_RS29095 CU102_29060 WP_106714470.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

38% id,
95% cov

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

38% id,
95% cov

AAT_STRAW / Q82DR2: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Streptomyces avermitilis

38% id,
95% cov

More...

CU102_RS07375 CU102_07380 WP_106710446.1: branched-chain amino acid aminotransferase
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

42% id,
87% cov

hisC CU102_RS10255 CU102_10265 WP_106710986.1: histidinol-phosphate transaminase
is similar to:
PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

34% id,
99% cov

AAPAT_CHLTE / Q8KDS8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 from Chlorobaculum tepidum

26% id,
91% cov

AAT_MUSP7 / C6C2Z3: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Musicola paradisiaca

22% id,
95% cov

CU102_RS07720 CU102_07725 WP_166648355.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

AAPAT_CERS1 / A3PMF8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Cereibacter sphaeroides

34% id,
100% cov

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

34% id,
98% cov

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

33% id,
98% cov

More...

CU102_RS14295 CU102_14280 WP_106711756.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

35% id,
97% cov

AAT_STRAW / Q82DR2: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Streptomyces avermitilis

34% id,
94% cov

AAPAT_RHIME / Q02635: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.79 from Rhizobium meliloti
Q02635: aspartate transaminase (EC 2.6.1.1); aspartate-prephenate aminotransferase (EC 2.6.1.78); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Sinorhizobium meliloti

33% id,
96% cov

More...

CU102_RS00760 CU102_00755 WP_245425092.1: alanine--glyoxylate aminotransferase family protein
is similar to:
PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

36% id,
91% cov

CU102_RS00160 CU102_00160 WP_106708959.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

31% id,
91% cov

CU102_RS20215 CU102_20210 WP_106712905.1: aminotransferase
is similar to:
PaperBLAST

Q8YY14: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

28% id,
97% cov

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

27% id,
99% cov

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

25% id,
98% cov

More...

CU102_RS00585 CU102_00580 WP_106709027.1: branched-chain amino acid aminotransferase
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

28% id,
94% cov

CU102_RS14060 CU102_14050 WP_106711785.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

23% id,
84% cov

ARO8 / P53090: aromatic amino acid/aminoadipate aminotransferase monomer (EC 2.6.1.39; EC 2.6.1.1; EC 2.6.1.28) from Saccharomyces cerevisiae

33% id,
33% cov

CU102_RS18715 CU102_18695 WP_106712728.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

atrD / B7STY2: L-tyrosine:2-oxoglutarate aminotransferase (EC 2.6.1.1) from Tapinella panuoides

24% id,
73% cov

CU102_RS05190 CU102_05205 WP_106709987.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

Q8YY14: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

26% id,
68% cov

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

26% id,
60% cov

AAT_THEMA / Q9X0Y2: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima

25% id,
62% cov

More...

CU102_RS03925 CU102_03940 WP_106709659.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

atrD / B7STY2: L-tyrosine:2-oxoglutarate aminotransferase (EC 2.6.1.1) from Tapinella panuoides

26% id,
56% cov

ARO9 / P38840: aromatic amino acid aminotransferase II (EC 2.6.1.1; EC 2.6.1.58; EC 2.6.1.28) from Saccharomyces cerevisiae

24% id,
31% cov

CU102_RS21230 CU102_21225 WP_106713098.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

AAPAT_NITEU / Q82WA8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Nitrosomonas europaea

22% id,
56% cov

cobD CU102_RS05930 CU102_05940 WP_106710326.1: threonine-phosphate decarboxylase CobD
is similar to:
PaperBLAST

tat / A0A0U1ZFM1: tyrosine aminotransferase (EC 2.6.1.1) from Prunella vulgaris

25% id,
42% cov

CU102_RS14460 CU102_14445 WP_106711816.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

ARO9 / P38840: aromatic amino acid aminotransferase II (EC 2.6.1.1; EC 2.6.1.58; EC 2.6.1.28) from Saccharomyces cerevisiae

21% id,
50% cov

CU102_RS18810 CU102_18790 WP_208113857.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

ARO8 / P53090: aromatic amino acid/aminoadipate aminotransferase monomer (EC 2.6.1.39; EC 2.6.1.1; EC 2.6.1.28) from Saccharomyces cerevisiae

30% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 22 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory