Curated BLAST for Genomes

 

Curated BLAST

Searching in Phyllobacterium brassicacearum STM 196 (GCF_003010955.1)

Found 25 curated entries in PaperBLAST's database that match '2.6.1.5' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 16 relevant proteins in Phyllobacterium brassicacearum STM 196, or try another query

CU102_RS20215 CU102_20210 WP_106712905.1: aminotransferase
is similar to:
PaperBLAST

ISS1_ARATH / Q9C969: Aromatic aminotransferase ISS1; Methionine aminotransferase ISS1; Phenylalanine aminotransferase ISS1; Protein INDOLE SEVERE SENSITIVE 1; Protein REVERSAL OF SAV3 PHENOTYPE 1; Tryptophan aminotransferase ISS1; Tyrosine aminotransferase ISS1; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.88 from Arabidopsis thaliana

28% id,
88% cov

A0A2K9VNZ8: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

26% id,
57% cov

TAT_ARATH / Q9LVY1: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Arabidopsis thaliana
Q9LVY1: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

27% id,
54% cov

More...

CU102_RS29095 CU102_29060 WP_106714470.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

ATTY_TRYCR / P33447: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Trypanosoma cruzi

26% id,
91% cov

A0A0A7DQ59: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

24% id,
95% cov

ATTY_CAEEL / Q93703: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Caenorhabditis elegans

29% id,
78% cov

More...

CU102_RS14295 CU102_14280 WP_106711756.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

TAT_ARATH / Q9LVY1: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Arabidopsis thaliana
Q9LVY1: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

27% id,
89% cov

ISS1_ARATH / Q9C969: Aromatic aminotransferase ISS1; Methionine aminotransferase ISS1; Phenylalanine aminotransferase ISS1; Protein INDOLE SEVERE SENSITIVE 1; Protein REVERSAL OF SAV3 PHENOTYPE 1; Tryptophan aminotransferase ISS1; Tyrosine aminotransferase ISS1; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.88 from Arabidopsis thaliana

29% id,
82% cov

A0A2K9VP07: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

25% id,
92% cov

More...

CU102_RS07720 CU102_07725 WP_166648355.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

A0A2K9VP55: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

26% id,
88% cov

V5M241: tyrosine transaminase (EC 2.6.1.5) from Petunia x

23% id,
85% cov

A0A0A7DPK0: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

22% id,
85% cov

More...

CU102_RS03165 CU102_03170 WP_106709531.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

A0A2K9VNZ8: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

25% id,
93% cov

Q9FN30: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

25% id,
94% cov

CU102_RS07230 CU102_07235 WP_106710509.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

Q9FN30: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

26% id,
90% cov

CU102_RS23675 CU102_23655 WP_106713543.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

ATTY_RAT / P04694: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Rattus norvegicus

25% id,
87% cov

ATTY_MOUSE / Q8QZR1: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Mus musculus
Q8QZR1: tyrosine transaminase (EC 2.6.1.5) from Mus musculus

25% id,
87% cov

CU102_RS14190 CU102_14175 WP_106711740.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

30% id,
70% cov

CU102_RS16215 CU102_16200 WP_106712150.1: LL-diaminopimelate aminotransferase
is similar to:
PaperBLAST

V5M241: tyrosine transaminase (EC 2.6.1.5) from Petunia x

25% id,
82% cov

CU102_RS18715 CU102_18695 WP_106712728.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

ATRD_TAPPA / B7STY2: L-tyrosine:2-oxoglutarate aminotransferase atrD; Atromentin biosynthesis protein D; EC 2.6.1.5 from Tapinella panuoides

24% id,
73% cov

cobD CU102_RS05930 CU102_05940 WP_106710326.1: threonine-phosphate decarboxylase CobD
is similar to:
PaperBLAST

ISS1_ARATH / Q9C969: Aromatic aminotransferase ISS1; Methionine aminotransferase ISS1; Phenylalanine aminotransferase ISS1; Protein INDOLE SEVERE SENSITIVE 1; Protein REVERSAL OF SAV3 PHENOTYPE 1; Tryptophan aminotransferase ISS1; Tyrosine aminotransferase ISS1; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.88 from Arabidopsis thaliana

26% id,
62% cov

Q67Y55: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

22% id,
73% cov

A0A0A7DPK0: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

23% id,
53% cov

More...

CU102_RS03925 CU102_03940 WP_106709659.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

AMT1_SERL9 / F8P1W6: L-tyrosine:2-oxoglutarate aminotransferase amt1; Atromentin biosynthesis protein amt1; EC 2.6.1.5 from Serpula lacrymans

26% id,
63% cov

ATRD_TAPPA / B7STY2: L-tyrosine:2-oxoglutarate aminotransferase atrD; Atromentin biosynthesis protein D; EC 2.6.1.5 from Tapinella panuoides

26% id,
56% cov

hisC CU102_RS10255 CU102_10265 WP_106710986.1: histidinol-phosphate transaminase
is similar to:
PaperBLAST

ISS1_ARATH / Q9C969: Aromatic aminotransferase ISS1; Methionine aminotransferase ISS1; Phenylalanine aminotransferase ISS1; Protein INDOLE SEVERE SENSITIVE 1; Protein REVERSAL OF SAV3 PHENOTYPE 1; Tryptophan aminotransferase ISS1; Tyrosine aminotransferase ISS1; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.88 from Arabidopsis thaliana

24% id,
60% cov

CU102_RS21230 CU102_21225 WP_106713098.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

AMT1_SERL9 / F8P1W6: L-tyrosine:2-oxoglutarate aminotransferase amt1; Atromentin biosynthesis protein amt1; EC 2.6.1.5 from Serpula lacrymans

22% id,
53% cov

CU102_RS05190 CU102_05205 WP_106709987.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

ATRD_TAPPA / B7STY2: L-tyrosine:2-oxoglutarate aminotransferase atrD; Atromentin biosynthesis protein D; EC 2.6.1.5 from Tapinella panuoides

24% id,
49% cov

ATTY_CAEEL / Q93703: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Caenorhabditis elegans

25% id,
45% cov

AMT1_SERL9 / F8P1W6: L-tyrosine:2-oxoglutarate aminotransferase amt1; Atromentin biosynthesis protein amt1; EC 2.6.1.5 from Serpula lacrymans

25% id,
37% cov

CU102_RS15250 CU102_15240 WP_106711968.1: bifunctional aspartate transaminase/aspartate 4-decarboxylase
is similar to:
PaperBLAST

ISS1_ARATH / Q9C969: Aromatic aminotransferase ISS1; Methionine aminotransferase ISS1; Phenylalanine aminotransferase ISS1; Protein INDOLE SEVERE SENSITIVE 1; Protein REVERSAL OF SAV3 PHENOTYPE 1; Tryptophan aminotransferase ISS1; Tyrosine aminotransferase ISS1; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.88 from Arabidopsis thaliana

36% id,
24% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

32365-33750 (frame +1) on NZ_PGGO01000017.1 Phyllobacterium brassicacearum strain STM 196 NODE_17_length_119326_cov_28.558, whole genome shotgun sequence
is similar to:
PaperBLAST

ISS1_ARATH / Q9C969: Aromatic aminotransferase ISS1; Methionine aminotransferase ISS1; Phenylalanine aminotransferase ISS1; Protein INDOLE SEVERE SENSITIVE 1; Protein REVERSAL OF SAV3 PHENOTYPE 1; Tryptophan aminotransferase ISS1; Tyrosine aminotransferase ISS1; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.88 from Arabidopsis thaliana
Also see hits to annotated proteins above

27% id,
95% cov

TAT_ARATH / Q9LVY1: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Arabidopsis thaliana
Q9LVY1: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana
Also see hits to annotated proteins above

25% id,
61% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory