Curated BLAST for Genomes

 

Curated BLAST

Searching in Phyllobacterium brassicacearum STM 196 (GCF_003010955.1)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Phyllobacterium brassicacearum STM 196, or try another query

CU102_RS17890 CU102_17875 WP_106712464.1: glucokinase
is similar to:
PaperBLAST

PS417_22685: Glucokinase (EC 2.7.1.2) from Pseudomonas simiae

39% id,
96% cov

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC 2.7.1.2 from Escherichia coli
Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli

38% id,
96% cov

Dshi_1655: glucokinase (EC 2.7.1.2) from Dinoroseobacter shibae

31% id,
96% cov

More...

CU102_RS06135 CU102_06145 WP_106710140.1: ROK family protein
is similar to:
PaperBLAST

Sama_2231: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

34% id,
97% cov

Sama_1405: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

33% id,
94% cov

GLK_BACSU / P54495: Glucokinase; Glucose kinase; EC 2.7.1.2 from Bacillus subtilis
P54495: glucokinase (EC 2.7.1.2) from Bacillus subtilis

30% id,
96% cov

More...

CU102_RS22250 CU102_22240 WP_106713292.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

30% id,
83% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

26% id,
98% cov

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

27% id,
91% cov

More...

CU102_RS17155 CU102_17140 WP_106712448.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

28% id,
88% cov

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

24% id,
84% cov

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

28% id,
63% cov

CU102_RS21595 CU102_21590 WP_106713156.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

23% id,
99% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

29% id,
51% cov

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

25% id,
60% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory