Curated BLAST for Genomes

 

Curated BLAST

Searching in Cereibacter johrii JA192 (GCF_003046325.1)

Found 25 curated entries in PaperBLAST's database that match '1.1.1.17' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Cereibacter johrii JA192, or try another query

C8J29_RS09125 C8J29_10335 WP_069330347.1: mannitol dehydrogenase family protein
is similar to:
PaperBLAST

MTLD_ECOLI / P09424: Mannitol-1-phosphate 5-dehydrogenase; EC 1.1.1.17 from Escherichia coli
MtlD / b3600: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Escherichia coli
mtlD / P09424: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Escherichia coli
P09424: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Escherichia coli

25% id,
99% cov

tdh C8J29_RS03485 C8J29_101690 WP_069330599.1: L-threonine 3-dehydrogenase
is similar to:
PaperBLAST

M1PD_ALIF1 / Q5E1G4: Mannitol-1-phosphate 5-dehydrogenase; EC 1.1.1.17 from Aliivibrio fischeri

21% id,
79% cov

C8J29_RS08785 C8J29_102743 WP_069333080.1: HAD family hydrolase
is similar to:
PaperBLAST

Q6FBP5: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17); mannitol-1-phosphatase (EC 3.1.3.22) from Acinetobacter baylyi

29% id,
26% cov

C8J29_RS07065 C8J29_102414 WP_069333390.1: HAD family hydrolase
is similar to:
PaperBLAST

D0C7J2: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17); mannitol-1-phosphatase (EC 3.1.3.22) from Acinetobacter baumannii

27% id,
25% cov

C8J29_RS11350 C8J29_103474 WP_069331817.1: HAD-IA family hydrolase
is similar to:
PaperBLAST

D0C7J2: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17); mannitol-1-phosphatase (EC 3.1.3.22) from Acinetobacter baumannii

26% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory