Curated BLAST for Genomes

 

Curated BLAST

Searching in Limnohabitans curvus MWH-C5 (GCF_003063475.1)

Found 43 curated entries in PaperBLAST's database that match '1.2.1.19' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Limnohabitans curvus MWH-C5, or try another query

B9Z44_RS11550 B9Z44_11535 WP_108359063.1: aldehyde dehydrogenase family protein
is similar to:		 PaperBLAST

AADH1_SOLLC / Q56R04: Aminoaldehyde dehydrogenase 1; SlAMADH1; 4-trimethylammoniobutyraldehyde dehydrogenase AMADH1; Aminobutyraldehyde dehydrogenase AMADH1; Betaine aldehyde dehydrogenase AMADH1; Gamma-guanidinobutyraldehyde dehydrogenase AMADH1; EC 1.2.1.-; EC 1.2.1.47; EC 1.2.1.19; EC 1.2.1.8; EC 1.2.1.54 from Solanum lycopersicum

 41% id,
95% cov

AADH2_PEA / Q93YB2: Aminoaldehyde dehydrogenase 2, peroxisomal; PsAMADH2; Aminobutyraldehyde dehydrogenase AMADH2; Gamma-guanidinobutyraldehyde dehydrogenase AMADH2; EC 1.2.1.-; EC 1.2.1.19; EC 1.2.1.54 from Pisum sativum
Q93YB2: aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Pisum sativum

 41% id,
95% cov

AL1A1_RABIT / Q8MI17: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Oryctolagus cuniculus

 41% id,
95% cov

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B9Z44_RS11745 B9Z44_11730 WP_108402515.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:		 PaperBLAST

ABDH_ECOLI / P77674: Gamma-aminobutyraldehyde dehydrogenase; ABALDH; 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; 5-aminopentanal dehydrogenase; EC 1.2.1.19; EC 1.2.1.- from Escherichia coli
PatD / b1444: γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
patD / P77674: γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
P77674: aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli

 38% id,
99% cov

AL1A1_RAT / P51647: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Rattus norvegicus

 38% id,
97% cov

AL1A1_MOUSE / P24549: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Mus musculus

 37% id,
97% cov

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B9Z44_RS01610 B9Z44_01615 WP_108401521.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:		 PaperBLAST

ABDH_ECOLI / P77674: Gamma-aminobutyraldehyde dehydrogenase; ABALDH; 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; 5-aminopentanal dehydrogenase; EC 1.2.1.19; EC 1.2.1.- from Escherichia coli
PatD / b1444: γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
patD / P77674: γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
P77674: aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli

 36% id,
100% cov

ADH1B_MAIZE / G5DDC2: Aminoaldehyde dehydrogenase 1b; ZmAMADH1b; 4-trimethylammoniobutyraldehyde dehydrogenase AMADH1b; Aminobutyraldehyde dehydrogenase AMADH1b; Betaine aldehyde dehydrogenase AMADH1b; Gamma-guanidinobutyraldehyde dehydrogenase AMADH1b; EC 1.2.1.-; EC 1.2.1.47; EC 1.2.1.19; EC 1.2.1.8; EC 1.2.1.54 from Zea mays
G5DDC2: aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Zea mays

 36% id,
94% cov

AADH2_MAIZE / C6KEM4: Aminoaldehyde dehydrogenase 2; ZmAMADH2; 4-trimethylammoniobutyraldehyde dehydrogenase AMADH2; Aminobutyraldehyde dehydrogenase AMADH2; Gamma-guanidinobutyraldehyde dehydrogenase AMADH2; EC 1.2.1.-; EC 1.2.1.47; EC 1.2.1.19; EC 1.2.1.54 from Zea mays
C6KEM4: aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Zea mays

 35% id,
95% cov

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B9Z44_RS09990 B9Z44_09975 WP_108402347.1: aldehyde dehydrogenase family protein
is similar to:		 PaperBLAST

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

 37% id,
95% cov

ABDH_ECOLI / P77674: Gamma-aminobutyraldehyde dehydrogenase; ABALDH; 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; 5-aminopentanal dehydrogenase; EC 1.2.1.19; EC 1.2.1.- from Escherichia coli
PatD / b1444: γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
patD / P77674: γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
P77674: aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli

 34% id,
98% cov

AL1A1_MOUSE / P24549: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Mus musculus

 35% id,
94% cov

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B9Z44_RS07890 B9Z44_07885 WP_108402129.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:		 PaperBLAST

ABDH_ECOLI / P77674: Gamma-aminobutyraldehyde dehydrogenase; ABALDH; 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; 5-aminopentanal dehydrogenase; EC 1.2.1.19; EC 1.2.1.- from Escherichia coli
PatD / b1444: γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
patD / P77674: γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
P77674: aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli

 32% id,
99% cov

AL1A1_MOUSE / P24549: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Mus musculus

 33% id,
95% cov

AL1A1_RAT / P51647: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Rattus norvegicus

 32% id,
95% cov

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B9Z44_RS07490 B9Z44_07485 WP_245912781.1: coniferyl aldehyde dehydrogenase
is similar to:		 PaperBLAST

AADH2_PEA / Q93YB2: Aminoaldehyde dehydrogenase 2, peroxisomal; PsAMADH2; Aminobutyraldehyde dehydrogenase AMADH2; Gamma-guanidinobutyraldehyde dehydrogenase AMADH2; EC 1.2.1.-; EC 1.2.1.19; EC 1.2.1.54 from Pisum sativum
Q93YB2: aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Pisum sativum

 30% id,
85% cov

ADH1B_MAIZE / G5DDC2: Aminoaldehyde dehydrogenase 1b; ZmAMADH1b; 4-trimethylammoniobutyraldehyde dehydrogenase AMADH1b; Aminobutyraldehyde dehydrogenase AMADH1b; Betaine aldehyde dehydrogenase AMADH1b; Gamma-guanidinobutyraldehyde dehydrogenase AMADH1b; EC 1.2.1.-; EC 1.2.1.47; EC 1.2.1.19; EC 1.2.1.8; EC 1.2.1.54 from Zea mays
G5DDC2: aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Zea mays

 30% id,
85% cov

kauB / Q9HTP2: 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54; EC 1.2.1.19) from Pseudomonas aeruginosa

 27% id,
91% cov

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The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory