Curated BLAST for Genomes

 

Curated BLAST

Searching in Limnohabitans curvus MWH-C5 (GCF_003063475.1)

Found 8 curated entries in PaperBLAST's database that match '1.3.8.6' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Limnohabitans curvus MWH-C5, or try another query

B9Z44_RS01320 B9Z44_01325 WP_108358861.1: acyl-CoA dehydrogenase
is similar to:
PaperBLAST

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

85% id,
100% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

84% id,
99% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

83% id,
99% cov

More...

B9Z44_RS14300 B9Z44_14270 WP_108402939.1: acyl-CoA dehydrogenase
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

82% id,
98% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

81% id,
100% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

80% id,
98% cov

More...

B9Z44_RS05530 B9Z44_05525 WP_108401894.1: isovaleryl-CoA dehydrogenase
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

35% id,
94% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

35% id,
94% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

33% id,
94% cov

More...

B9Z44_RS01325 B9Z44_01330 WP_108358862.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

32% id,
95% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

33% id,
90% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

31% id,
96% cov

More...

B9Z44_RS05510 B9Z44_05505 WP_108401891.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

30% id,
93% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

30% id,
94% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

28% id,
93% cov

More...

B9Z44_RS14760 B9Z44_14725 WP_245912850.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

28% id,
92% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

30% id,
86% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

26% id,
98% cov

More...

B9Z44_RS01600 B9Z44_01605 WP_108401520.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

27% id,
94% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

26% id,
94% cov

GCDH_PIG / P81140: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Sus scrofa

25% id,
92% cov

More...

aliB B9Z44_RS01340 B9Z44_01345 WP_108358864.1: cyclohexanecarboxyl-CoA dehydrogenase
is similar to:
PaperBLAST

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

26% id,
95% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

27% id,
94% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

26% id,
94% cov

B9Z44_RS05320 B9Z44_05315 WP_108401872.1: acyl-CoA dehydrogenase C-terminal domain-containing protein
is similar to:
PaperBLAST

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

25% id,
95% cov

GCDH_HUMAN / Q92947: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Homo sapiens
Q92947: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Homo sapiens

26% id,
69% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

29% id,
59% cov

More...

B9Z44_RS11380 B9Z44_11365 WP_108402490.1: acyl-CoA dehydrogenase
is similar to:
PaperBLAST

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

26% id,
81% cov

GCDH_PIG / P81140: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Sus scrofa

26% id,
70% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

28% id,
61% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory