Curated BLAST for Genomes

 

Curated BLAST

Searching in Limnohabitans curvus MWH-C5 (GCF_003063475.1)

Found 11 curated entries in PaperBLAST's database that match '3.1.1.17' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Limnohabitans curvus MWH-C5, or try another query

B9Z44_RS02155 B9Z44_02160 WP_108401582.1: SMP-30/gluconolactonase/LRE family protein
is similar to:
PaperBLAST

GNL_ZYMMO / Q01578: Gluconolactonase; D-glucono-delta-lactone lactonohydrolase; EC 3.1.1.17 from Zymomonas mobilis
gnl / Q01578: gluconolactonase subunit (EC 3.1.1.17) from Zymomonas mobilis
Q01578: gluconolactonase (EC 3.1.1.17) from Zymomonas mobilis

34% id,
86% cov

B9Z44_RS02190 B9Z44_02195 WP_108360017.1: SMP-30/gluconolactonase/LRE family protein
is similar to:
PaperBLAST

GNL_ZYMMO / Q01578: Gluconolactonase; D-glucono-delta-lactone lactonohydrolase; EC 3.1.1.17 from Zymomonas mobilis
gnl / Q01578: gluconolactonase subunit (EC 3.1.1.17) from Zymomonas mobilis
Q01578: gluconolactonase (EC 3.1.1.17) from Zymomonas mobilis

28% id,
83% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory