Curated BLAST for Genomes

 

Curated BLAST

Searching in Limnohabitans curvus MWH-C5 (GCF_003063475.1)

Found 1 curated entries in PaperBLAST's database that match '2-deoxy-3-keto-D-ribonate cleavage enzyme' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Limnohabitans curvus MWH-C5, or try another query

B9Z44_RS10230 B9Z44_10215 WP_108402374.1: 3-keto-5-aminohexanoate cleavage protein
is similar to:
PaperBLAST

H281DRAFT_00641: 2-deoxy-3-keto-D-ribonate cleavage enzyme from Paraburkholderia bryophila

32% id,
96% cov

H281DRAFT_00641: 2-deoxy-3-keto-D-ribonate cleavage enzyme from Paraburkholderia bryophila

35% id,
37% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory