Curated BLAST for Genomes

 

Curated BLAST

Searching in Limnohabitans curvus MWH-C5 (GCF_003063475.1)

Found 7 curated entries in PaperBLAST's database that match 'glutamylputrescine oxidase' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Limnohabitans curvus MWH-C5, or try another query

B9Z44_RS06620 B9Z44_06620 WP_108360389.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli
puuB / BAD88709.1: gamma-glutamylputrescine oxidase from Escherichia coli

32% id,
15% cov

B9Z44_RS10540 B9Z44_10525 WP_108402409.1: D-amino acid dehydrogenase
is similar to:
PaperBLAST

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli
puuB / BAD88709.1: gamma-glutamylputrescine oxidase from Escherichia coli

44% id,
11% cov

lpdA B9Z44_RS13470 B9Z44_13440 WP_108402666.1: dihydrolipoyl dehydrogenase
is similar to:
PaperBLAST

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli
puuB / BAD88709.1: gamma-glutamylputrescine oxidase from Escherichia coli

36% id,
12% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory