Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanospirillum lacunae Ki8-1 (GCF_003173355.1)

Found 33 curated entries in PaperBLAST's database that match '1.5.1.2' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Methanospirillum lacunae Ki8-1, or try another query

DK846_RS00065 DK846_00065 WP_109966884.1: pyrroline-5-carboxylate reductase dimerization domain-containing protein
is similar to:
PaperBLAST

P5CR3_BACSU / Q00777: Pyrroline-5-carboxylate reductase 3; P5C reductase 3; P5CR 3; PCA reductase 3; EC 1.5.1.2 from Bacillus subtilis

34% id,
99% cov

P5CR_ECOLI / P0A9L8: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Escherichia coli
ProC / b0386: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Escherichia coli
proC / P0A9L8: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Escherichia coli

28% id,
90% cov

PHQD_PENFE / L0E163: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; Paraherquamide biosynthesis cluster protein D; EC 1.5.1.2 from Penicillium fellutanum

29% id,
84% cov

More...

DK846_RS05510 DK846_05510 WP_109967941.1: NAD(P)-binding domain-containing protein
is similar to:
PaperBLAST

DVU2332: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Desulfovibrio vulgaris

27% id,
93% cov

Q4DH60: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Trypanosoma cruzi

25% id,
89% cov

P5CR2_BACSU / P54552: Pyrroline-5-carboxylate reductase 2; P5C reductase 2; P5CR 2; PCA reductase 2; EC 1.5.1.2 from Bacillus subtilis

24% id,
88% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory