Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanospirillum lacunae Ki8-1 (GCF_003173355.1)

Found 85 curated entries in PaperBLAST's database that match '2.3.1.16' as complete word(s).

These curated entries have 64 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methanospirillum lacunae Ki8-1, or try another query

DK846_RS15640 DK846_15645 WP_109969931.1: thiolase domain-containing protein
is similar to:
PaperBLAST

mvaE / A0A384E138: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Methanothermococcus thermolithotrophicus

52% id,
99% cov

tioL / Q5P8S8: 3-oxoacyl CoA thiolase (EC 2.3.1.16) from Aromatoleum aromaticum

32% id,
99% cov

SCP2_CHICK / Q07598: Sterol carrier protein 2; SCP-2; Acetyl-CoA C-myristoyltransferase; Non-specific lipid-transfer protein; NSL-TP; Propanoyl-CoA C-acyltransferase; SCP-2/3-oxoacyl-CoA thiolase; SCP-2/thiolase; SCP-chi; SCPX; Sterol carrier protein X; SCP-X; EC 2.3.1.155; EC 2.3.1.176; EC 2.3.1.16 from Gallus gallus

34% id,
71% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory