Curated BLAST for Genomes

 

Curated BLAST

Searching in Nocardioides daejeonensis MJ31 (GCF_003194585.1)

Found 32 curated entries in PaperBLAST's database that match '2.6.1.13' as complete word(s).

These curated entries have 26 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Nocardioides daejeonensis MJ31, or try another query

rocD DNK54_RS11795 WP_110207179.1: ornithine--oxo-acid transaminase
is similar to:		 PaperBLAST

OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis

 50% id,
98% cov

Echvi_0577: Ornithine aminotransferase (EC 2.6.1.13) from Echinicola vietnamensis

 46% id,
96% cov

OAT_YEAST / P07991: Ornithine aminotransferase; OTAse; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Saccharomyces cerevisiae

 44% id,
99% cov

More...

DNK54_RS04735 WP_110205831.1: acetylornithine transaminase
is similar to:		 PaperBLAST

aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa

 42% id,
93% cov

OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis

 37% id,
94% cov

OAT_RAT / P04182: Ornithine aminotransferase, mitochondrial; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Rattus norvegicus

 38% id,
87% cov

More...

hemL DNK54_RS15410 WP_110207863.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:		 PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

 30% id,
72% cov

OAT_EMENI / Q92413: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Emericella nidulans
otaA: ornithine aminotransferase; EC 2.6.1.13 from Emericella nidulans

 27% id,
77% cov

Q98TS5: ornithine aminotransferase (EC 2.6.1.13) from Xenopus laevis

 24% id,
84% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

389012-390733 (frame +2) on NZ_QHKZ01000005.1 Nocardioides daejeonensis strain MJ31 Scaffold5_1, whole genome shotgun sequence
is similar to:		 PaperBLAST

Q98TS5: ornithine aminotransferase (EC 2.6.1.13) from Xenopus laevis
Also see hits to annotated proteins above

 25% id,
87% cov

A0A674DA32: ornithine aminotransferase (EC 2.6.1.13) from Salmo trutta
Also see hits to annotated proteins above

 25% id,
82% cov

Q2Z0F8: ornithine aminotransferase (EC 2.6.1.13) from Agaricus bisporus
Also see hits to annotated proteins above

 26% id,
79% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory