Curated BLAST for Genomes

 

Curated BLAST

Searching in Nocardioides daejeonensis MJ31 (GCF_003194585.1)

Found 4 curated entries in PaperBLAST's database that match '2.6.1.84' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Nocardioides daejeonensis MJ31, or try another query

DNK54_RS10510 WP_110206897.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

ARUH_PSEAE / Q9HUI9: Arginine--pyruvate transaminase AruH; EC 2.6.1.84 from Pseudomonas aeruginosa
aruH / Q9HUI9: L-arginine:pyruvate transaminase subunit (EC 2.6.1.84) from Pseudomonas aeruginosa
Q9HUI9: arginine-pyruvate transaminase (EC 2.6.1.84) from Pseudomonas aeruginosa

38% id,
88% cov

PP_3721: arginine:pyruvate transaminase AruH (EC 2.6.1.84) from Pseudomonas putida

35% id,
88% cov

DNK54_RS15145 WP_110207818.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

ARUH_PSEAE / Q9HUI9: Arginine--pyruvate transaminase AruH; EC 2.6.1.84 from Pseudomonas aeruginosa
aruH / Q9HUI9: L-arginine:pyruvate transaminase subunit (EC 2.6.1.84) from Pseudomonas aeruginosa
Q9HUI9: arginine-pyruvate transaminase (EC 2.6.1.84) from Pseudomonas aeruginosa

30% id,
88% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory