Curated BLAST for Genomes

 

Curated BLAST

Searching in Nocardioides daejeonensis MJ31 (GCF_003194585.1)

Found 6 curated entries in PaperBLAST's database that match '3.5.1.53' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Nocardioides daejeonensis MJ31, or try another query

DNK54_RS08055 WP_110206413.1: carbon-nitrogen hydrolase family protein
is similar to:
PaperBLAST

aguB / Q9I6J8: N-carbamoylputrascine amidohydrolase subunit (EC 3.5.1.53) from Pseudomonas aeruginosa

32% id,
95% cov

DNK54_RS16985 WP_110208198.1: carbon-nitrogen hydrolase family protein
is similar to:
PaperBLAST

aguB / A0A1J6PBK3: N-carbamoylputrescine amidohydrolase (EC 3.5.1.53) from Campylobacter jejuni

27% id,
92% cov

DNK54_RS14440 WP_110207698.1: carbon-nitrogen hydrolase family protein
is similar to:
PaperBLAST

aguB / A0A1J6PBK3: N-carbamoylputrescine amidohydrolase (EC 3.5.1.53) from Campylobacter jejuni

25% id,
96% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory