Curated BLAST for Genomes

 

Curated BLAST

Searching in Nocardioides daejeonensis MJ31 (GCF_003194585.1)

Found 16 curated entries in PaperBLAST's database that match '3.5.3.6' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Nocardioides daejeonensis MJ31, or try another query

DNK54_RS04295 WP_110205669.1: arginine deiminase
is similar to:
PaperBLAST

P13981: arginine deiminase (EC 3.5.3.6) from Pseudomonas aeruginosa

61% id,
97% cov

A7LKB0: arginine deiminase (EC 3.5.3.6) from Pseudomonas plecoglossicida

59% id,
98% cov

Q88P52: arginine deiminase (EC 3.5.3.6) from Pseudomonas putida

58% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory