Curated BLAST for Genomes

 

Curated BLAST

Searching in Phyllobacterium leguminum ORS 1419 (GCF_003217235.1)

Found 26 curated entries in PaperBLAST's database that match '4.1.2.4' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Phyllobacterium leguminum ORS 1419, or try another query

deoC C7477_RS11865 C7477_11349 WP_110752346.1: deoxyribose-phosphate aldolase
is similar to:
PaperBLAST

DEOC_ECOLI / P0A6L0: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Escherichia coli
Tlr / b4381: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Escherichia coli
deoC / P0A6L0: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Escherichia coli

51% id,
99% cov

Q7WT44: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Klebsiella pneumoniae

50% id,
99% cov

DEOC_SALTY / Q8ZJV8: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Salmonella typhimurium

50% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory