Searching in Rhodobacter viridis JA737 (GCF_003217355.1)
Found 14 curated entries in PaperBLAST's database that match '4.2.1.25' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Rhodobacter viridis JA737, or try another query
| ilvD C8J30_RS14975 C8J30_11450 WP_110806649.1: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
SM_b20890: L-arabonate dehydratase (EC 4.2.1.25) from Sinorhizobium meliloti | 35% id, 90% cov |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 29% id, 84% cov |
ARADA_AZOBR / Q1JUQ1: L-arabonate dehydratase; L-arabinonate dehydratase; EC 4.2.1.25 from Azospirillum brasilense | 31% id, 75% cov |
| edd C8J30_RS09805 C8J30_106108 WP_110805670.1: phosphogluconate dehydratase is similar to: | PaperBLAST |
HSERO_RS05205: L-arabonate dehydratase (EC 4.2.1.25) from Herbaspirillum seropedicae | 31% id, 83% cov |
PS417_11000: L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas simiae | 31% id, 83% cov |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 31% id, 83% cov |
| menC C8J30_RS16155 C8J30_11742 WP_110806872.1: o-succinylbenzoate synthase is similar to: | PaperBLAST |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 24% id, 86% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory