Curated BLAST for Genomes

 

Curated BLAST

Searching in Algoriphagus aquaeductus T4 (GCF_003253485.1)

Found 3 curated entries in PaperBLAST's database that match 'sorbitol-6-phosphate dehydrogenase' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Algoriphagus aquaeductus T4, or try another query

fabG CLV31_RS07895 CLV31_104328 WP_111392325.1: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

32% id,
96% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

26% id,
98% cov

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

26% id,
98% cov

CLV31_RS07185 CLV31_104183 WP_111392201.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

32% id,
97% cov

CLV31_RS16420 CLV31_11378 WP_111394018.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

31% id,
97% cov

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

30% id,
98% cov

CLV31_RS05620 CLV31_103247 WP_111392034.1: SDR family oxidoreductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

31% id,
97% cov

CLV31_RS07350 CLV31_104216 WP_111392228.1: SDR family oxidoreductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

30% id,
97% cov

CLV31_RS18695 CLV31_1189 WP_111394607.1: SDR family oxidoreductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

30% id,
94% cov

CLV31_RS09670 CLV31_10657 WP_111392696.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

29% id,
92% cov

CLV31_RS09505 CLV31_10623 WP_111392664.1: 3-ketoacyl-ACP reductase
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

27% id,
100% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

26% id,
100% cov

CLV31_RS03320 CLV31_102203 WP_111391454.1: SDR family oxidoreductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

26% id,
97% cov

CLV31_RS04905 CLV31_10399 WP_111391775.1: bifunctional aldolase/short-chain dehydrogenase
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

22% id,
98% cov

CLV31_RS19060 CLV31_11880 WP_111394687.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

30% id,
71% cov

CLV31_RS06675 CLV31_10478 WP_111392110.1: SDR family oxidoreductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

25% id,
61% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory