Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhodanobacter denitrificans FW104-10B01 (GCF_021560695.1)

Found 25 curated entries in PaperBLAST's database that match '2.6.1.5' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Rhodanobacter denitrificans FW104-10B01, or try another query

LRK54_RS10685 LRK54_10685 WP_027490460.1: amino acid aminotransferase
is similar to:
PaperBLAST

AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli

49% id,
100% cov

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli

47% id,
100% cov

TYRB_KLEPN / O85746: Tyrosine aminotransferase; TyrAT; Aromatic-amino-acid transaminase; Aspartate aminotransferase; EC 2.6.1.5; EC 2.6.1.57; EC 2.6.1.1 from Klebsiella pneumoniae

45% id,
100% cov

More...

hemL LRK54_RS06580 LRK54_06580 WP_007514216.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

37% id,
93% cov

LRK54_RS11155 LRK54_11155 WP_027490509.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

A0A2K9VP07: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

27% id,
93% cov

A0A0A7DPK0: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

25% id,
93% cov

ATTY_RAT / P04694: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Rattus norvegicus

28% id,
82% cov

More...

LRK54_RS04500 LRK54_04500 WP_027490801.1: acetyl ornithine aminotransferase family protein
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

28% id,
91% cov

LRK54_RS06590 LRK54_06590 WP_027489558.1: acetylornithine/succinylornithine family transaminase
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

28% id,
88% cov

LRK54_RS00725 LRK54_00725 WP_015447464.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

ISS1_ARATH / Q9C969: Aromatic aminotransferase ISS1; Methionine aminotransferase ISS1; Phenylalanine aminotransferase ISS1; Protein INDOLE SEVERE SENSITIVE 1; Protein REVERSAL OF SAV3 PHENOTYPE 1; Tryptophan aminotransferase ISS1; Tyrosine aminotransferase ISS1; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.88 from Arabidopsis thaliana

25% id,
94% cov

A0A2K9VP55: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

27% id,
88% cov

ATTY_MOUSE / Q8QZR1: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Mus musculus
Q8QZR1: tyrosine transaminase (EC 2.6.1.5) from Mus musculus

26% id,
85% cov

More...

LRK54_RS00830 LRK54_00830 WP_027490214.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

A0A0A7DPK0: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

25% id,
87% cov

TAT_ARATH / Q9LVY1: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Arabidopsis thaliana
Q9LVY1: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

25% id,
87% cov

A0A2K9VP07: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

25% id,
80% cov

More...

LRK54_RS01370 LRK54_01370 WP_027490233.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

TAT_ARATH / Q9LVY1: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Arabidopsis thaliana
Q9LVY1: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

28% id,
54% cov

A0A2K9VP55: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

27% id,
55% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2475638-2476936 (frame -3) on NZ_CP088922.1 Rhodanobacter denitrificans strain FW104-10B01 chromosome, complete genome
is similar to:
PaperBLAST

ATTY_TRYCR / P33447: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Trypanosoma cruzi

29% id,
91% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory