Curated BLAST for Genomes

 

Curated BLAST

Searching in Flavobacterium glycines Gm-149 (GCF_900100165.1)

Found 25 curated entries in PaperBLAST's database that match '2.6.1.5' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Flavobacterium glycines Gm-149, or try another query

hemL BLR17_RS06720 SAMN05192550_1368 WP_066326600.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

34% id,
92% cov

BLR17_RS00150 SAMN05192550_0030 WP_066328699.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

A0A0A7DQ59: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

26% id,
90% cov

A0A2K9VP55: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

26% id,
87% cov

Q9FN30: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

25% id,
89% cov

More...

BLR17_RS05750 SAMN05192550_1170 WP_066326841.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

ISS1_ARATH / Q9C969: Aromatic aminotransferase ISS1; Methionine aminotransferase ISS1; Phenylalanine aminotransferase ISS1; Protein INDOLE SEVERE SENSITIVE 1; Protein REVERSAL OF SAV3 PHENOTYPE 1; Tryptophan aminotransferase ISS1; Tyrosine aminotransferase ISS1; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.88 from Arabidopsis thaliana

25% id,
94% cov

A0A0A7DQ59: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

24% id,
93% cov

A0A0A7DPK0: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

26% id,
87% cov

BLR17_RS09610 SAMN05192550_1952 WP_066329653.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

27% id,
79% cov

BLR17_RS10870 SAMN05192550_2209 WP_066329202.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

ATTY_TRYCR / P33447: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Trypanosoma cruzi

23% id,
94% cov

ATTY_CAEEL / Q93703: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Caenorhabditis elegans

25% id,
82% cov

ATTY_HUMAN / P17735: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Homo sapiens

24% id,
81% cov

More...

BLR17_RS07170 SAMN05192550_1458 WP_066324915.1: methionine aminotransferase
is similar to:
PaperBLAST

ATTY_TRYCR / P33447: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Trypanosoma cruzi

23% id,
89% cov

ATTY_CAEEL / Q93703: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Caenorhabditis elegans

22% id,
78% cov

BLR17_RS14830 SAMN05192550_3016 WP_066329149.1: aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

25% id,
62% cov

bioA BLR17_RS01755 SAMN05192550_0357 WP_066328281.1: adenosylmethionine--8-amino-7-oxononanoate transaminase
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

29% id,
26% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

309839-311356 (frame +2) on NZ_FNEO01000002.1 Flavobacterium glycines strain Gm-149, whole genome shotgun sequence
is similar to:
PaperBLAST

ATTY_RAT / P04694: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Rattus norvegicus
Also see hits to annotated proteins above

24% id,
55% cov

ATTY_MOUSE / Q8QZR1: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Mus musculus
Q8QZR1: tyrosine transaminase (EC 2.6.1.5) from Mus musculus
Also see hits to annotated proteins above

24% id,
55% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory