Curated BLAST for Genomes

 

Curated BLAST

Searching in Flavobacterium glycines Gm-149 (GCF_900100165.1)

Found 60 curated entries in PaperBLAST's database that match '2.7.2.4' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Flavobacterium glycines Gm-149, or try another query

thrA BLR17_RS14640 SAMN05192550_2976 WP_066329102.1: bifunctional aspartate kinase/homoserine dehydrogenase I
is similar to:
PaperBLAST

Echvi_2000: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Echinicola vietnamensis

48% id,
100% cov

CA265_RS23475: aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Pedobacter sp.

46% id,
100% cov

BT2403: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Bacteroides thetaiotaomicron

45% id,
100% cov

More...

thrA BLR17_RS00255 SAMN05192550_0052 WP_066328676.1: bifunctional aspartate kinase/homoserine dehydrogenase I
is similar to:
PaperBLAST

Echvi_2000: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Echinicola vietnamensis

35% id,
100% cov

BT2403: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Bacteroides thetaiotaomicron

35% id,
100% cov

Q57991: aspartate kinase (EC 2.7.2.4) from Methanocaldococcus jannaschii

34% id,
97% cov

More...

BLR17_RS04505 SAMN05192550_0917 WP_066327343.1: aspartate kinase
is similar to:
PaperBLAST

AK3_ECOLI / P08660: Lysine-sensitive aspartokinase 3; Aspartate kinase III; AKIII; Lysine-sensitive aspartokinase III; EC 2.7.2.4 from Escherichia coli
Apk / b4024: aspartate kinase III (EC 2.7.2.4) from Escherichia coli
lysC / P08660: aspartate kinase III (EC 2.7.2.4) from Escherichia coli
P08660: aspartate kinase (EC 2.7.2.4) from Escherichia coli

32% id,
86% cov

Q57991: aspartate kinase (EC 2.7.2.4) from Methanocaldococcus jannaschii

31% id,
81% cov

Q9RUL9: aspartate kinase (EC 2.7.2.4) from Deinococcus radiodurans

28% id,
84% cov

More...

pyrH BLR17_RS04285 SAMN05192550_0873 WP_066327597.1: UMP kinase
is similar to:
PaperBLAST

O69077: aspartate kinase (EC 2.7.2.4) from Pseudomonas aeruginosa

26% id,
53% cov

AK_PSEFS / C3JXY0: Aspartate kinase; Aspartokinase; EC 2.7.2.4 from Pseudomonas fluorescens

25% id,
54% cov

AKLYS_STUS1 / A4VJB4: Aspartate kinase Ask_LysC; Aspartokinase; EC 2.7.2.4 from Stutzerimonas stutzeri

29% id,
23% cov

lysA BLR17_RS08045 SAMN05192550_1630 WP_066324151.1: diaminopimelate decarboxylase
is similar to:
PaperBLAST

ABZR86_RS19560: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica

33% id,
42% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory