Curated BLAST for Genomes

 

Curated BLAST

Searching in Flavobacterium glycines Gm-149 (GCF_900100165.1)

Found 17 curated entries in PaperBLAST's database that match '3.2.1.108' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Flavobacterium glycines Gm-149, or try another query

BLR17_RS01685 SAMN05192550_0342 WP_066328293.1: glycoside hydrolase family 2 TIM barrel-domain containing protein
is similar to:
PaperBLAST

lacL / Q19R72: beta-galactosidase large subunit (EC 3.2.1.108; EC 3.2.1.23) from Limosilactobacillus reuteri

34% id,
99% cov

LacZ / b0344: β-galactosidase (EC 3.2.1.108) from Escherichia coli
lacZ / P00722: β-galactosidase (EC 3.2.1.108) from Escherichia coli

33% id,
98% cov

BLR17_RS01125 SAMN05192550_0229 WP_066328382.1: glycoside hydrolase family 2 TIM barrel-domain containing protein
is similar to:
PaperBLAST

LacZ / b0344: β-galactosidase (EC 3.2.1.108) from Escherichia coli
lacZ / P00722: β-galactosidase (EC 3.2.1.108) from Escherichia coli

33% id,
99% cov

lacL / Q19R72: beta-galactosidase large subunit (EC 3.2.1.108; EC 3.2.1.23) from Limosilactobacillus reuteri

34% id,
94% cov

BLR17_RS02220 SAMN05192550_0452 WP_066328166.1: glycoside hydrolase family 2 TIM barrel-domain containing protein
is similar to:
PaperBLAST

LacZ / b0344: β-galactosidase (EC 3.2.1.108) from Escherichia coli
lacZ / P00722: β-galactosidase (EC 3.2.1.108) from Escherichia coli

33% id,
98% cov

lacL / Q19R72: beta-galactosidase large subunit (EC 3.2.1.108; EC 3.2.1.23) from Limosilactobacillus reuteri

32% id,
98% cov

BLR17_RS09380 SAMN05192550_1905 WP_217635895.1: family 1 glycosylhydrolase
is similar to:
PaperBLAST

AAQ79765.1: lactase phlorizin hydrolase (LCT;LPH) (EC 3.2.1.108|3.2.1.62)

32% id,
97% cov

LPH_SHEEP / W5PLZ6: Lactase/phlorizin hydrolase; Lactase/glycosylceramidase; EC 3.2.1.108; EC 3.2.1.62 from Ovis aries

34% id,
24% cov

LPH_RAT / Q02401: Lactase/phlorizin hydrolase; Lactase/glycosylceramidase; EC 3.2.1.108; EC 3.2.1.62 from Rattus norvegicus
Q02401: lactase (EC 3.2.1.108); phloretin hydrolase (EC 3.7.1.4) from Rattus norvegicus

33% id,
24% cov

More...

BLR17_RS00725 SAMN05192550_0148 WP_066328557.1: glycoside hydrolase family 2 TIM barrel-domain containing protein
is similar to:
PaperBLAST

lacL / Q19R72: beta-galactosidase large subunit (EC 3.2.1.108; EC 3.2.1.23) from Limosilactobacillus reuteri

27% id,
81% cov

LacZ / b0344: β-galactosidase (EC 3.2.1.108) from Escherichia coli
lacZ / P00722: β-galactosidase (EC 3.2.1.108) from Escherichia coli

29% id,
39% cov

BLR17_RS09530 SAMN05192550_1936 WP_066329683.1: glycoside hydrolase family 2 TIM barrel-domain containing protein
is similar to:
PaperBLAST

lacL / Q19R72: beta-galactosidase large subunit (EC 3.2.1.108; EC 3.2.1.23) from Limosilactobacillus reuteri

26% id,
69% cov

BLR17_RS06520 SAMN05192550_1327 WP_066326666.1: glycoside hydrolase family 2 TIM barrel-domain containing protein
is similar to:
PaperBLAST

lacL / Q19R72: beta-galactosidase large subunit (EC 3.2.1.108; EC 3.2.1.23) from Limosilactobacillus reuteri

28% id,
58% cov

LacZ / b0344: β-galactosidase (EC 3.2.1.108) from Escherichia coli
lacZ / P00722: β-galactosidase (EC 3.2.1.108) from Escherichia coli

24% id,
53% cov

BLR17_RS02090 SAMN05192550_0425 WP_066328198.1: glycoside hydrolase family 2 TIM barrel-domain containing protein
is similar to:
PaperBLAST

LacZ / b0344: β-galactosidase (EC 3.2.1.108) from Escherichia coli
lacZ / P00722: β-galactosidase (EC 3.2.1.108) from Escherichia coli

24% id,
68% cov

lacL / Q19R72: beta-galactosidase large subunit (EC 3.2.1.108; EC 3.2.1.23) from Limosilactobacillus reuteri

27% id,
57% cov

BLR17_RS01575 SAMN05192550_0320 WP_245683102.1: glycoside hydrolase family 2 TIM barrel-domain containing protein
is similar to:
PaperBLAST

LacZ / b0344: β-galactosidase (EC 3.2.1.108) from Escherichia coli
lacZ / P00722: β-galactosidase (EC 3.2.1.108) from Escherichia coli

27% id,
57% cov

BLR17_RS14705 SAMN05192550_2989 WP_066329185.1: beta-galactosidase
is similar to:
PaperBLAST

lacA / P29853: β-galactosidase (EC 3.2.1.23; EC 3.2.1.108) from Aspergillus niger

25% id,
49% cov

bga1 / Q70SY0: β-galactosidase (EC 3.2.1.23; EC 3.2.1.108) from Hypocrea jecorina

32% id,
19% cov

BLR17_RS16395 SAMN05192550_0472 WP_066328130.1: glycoside hydrolase family 2 TIM barrel-domain containing protein
is similar to:
PaperBLAST

LacZ / b0344: β-galactosidase (EC 3.2.1.108) from Escherichia coli
lacZ / P00722: β-galactosidase (EC 3.2.1.108) from Escherichia coli

24% id,
39% cov

BLR17_RS01165 SAMN05192550_0237 WP_217635880.1: glycoside hydrolase family 2 TIM barrel-domain containing protein
is similar to:
PaperBLAST

LacZ / b0344: β-galactosidase (EC 3.2.1.108) from Escherichia coli
lacZ / P00722: β-galactosidase (EC 3.2.1.108) from Escherichia coli

23% id,
34% cov

BLR17_RS10180 SAMN05192550_2067 WP_066323750.1: beta-galactosidase
is similar to:
PaperBLAST

bga1 / Q70SY0: β-galactosidase (EC 3.2.1.23; EC 3.2.1.108) from Hypocrea jecorina

31% id,
22% cov

lacA / P29853: β-galactosidase (EC 3.2.1.23; EC 3.2.1.108) from Aspergillus niger

37% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory