Curated BLAST for Genomes

 

Curated BLAST

Searching in Flavobacterium glycines Gm-149 (GCF_900100165.1)

Found 1 curated entries in PaperBLAST's database that match '4.2.1.52' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Flavobacterium glycines Gm-149, or try another query

dapA BLR17_RS10490 SAMN05192550_2130 WP_066323608.1: 4-hydroxy-tetrahydrodipicolinate synthase
is similar to:
PaperBLAST

dapA2: dihydrodipicolinate synthase; EC 4.2.1.52 from Bacillus anthracis

38% id,
99% cov

BLR17_RS04940 SAMN05192550_1006 WP_066327576.1: dihydrodipicolinate synthase family protein
is similar to:
PaperBLAST

dapA2: dihydrodipicolinate synthase; EC 4.2.1.52 from Bacillus anthracis

28% id,
99% cov

BLR17_RS00850 SAMN05192550_0173 WP_066328440.1: dihydrodipicolinate synthase family protein
is similar to:
PaperBLAST

dapA2: dihydrodipicolinate synthase; EC 4.2.1.52 from Bacillus anthracis

28% id,
97% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory