Curated BLAST for Genomes

 

Curated BLAST

Searching in Flavobacterium glycines Gm-149 (GCF_900100165.1)

Found 40 curated entries in PaperBLAST's database that match '4.3.3.7' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Flavobacterium glycines Gm-149, or try another query

dapA BLR17_RS10490 SAMN05192550_2130 WP_066323608.1: 4-hydroxy-tetrahydrodipicolinate synthase
is similar to:
PaperBLAST

DAPA_NEIMB / Q9JZR4: 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7 from Neisseria meningitidis
Q9JZR4: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Neisseria meningitidis

42% id,
98% cov

A5F699: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Vibrio cholerae

40% id,
98% cov

dapA / Q04796: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Bacillus subtilis

39% id,
96% cov

More...

BLR17_RS00850 SAMN05192550_0173 WP_066328440.1: dihydrodipicolinate synthase family protein
is similar to:
PaperBLAST

Q8A3Z0: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Bacteroides thetaiotaomicron

34% id,
96% cov

DAPA_PSEAE / Q9I4W3: 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7 from Pseudomonas aeruginosa
Q9I4W3: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Pseudomonas aeruginosa

32% id,
91% cov

O67216: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Aquifex aeolicus

29% id,
100% cov

More...

BLR17_RS04940 SAMN05192550_1006 WP_066327576.1: dihydrodipicolinate synthase family protein
is similar to:
PaperBLAST

DAPA_METJA / Q57695: 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7 from Methanocaldococcus jannaschii

31% id,
98% cov

dapA / Q65JG7: dihydrodipicolinate synthase subunit (EC 4.3.3.7) from Bacillus licheniformis

28% id,
100% cov

dapA / Q04796: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Bacillus subtilis

28% id,
100% cov

More...

BLR17_RS03115 SAMN05192550_0640 WP_066327755.1: dihydrodipicolinate synthase family protein
is similar to:
PaperBLAST

A9CL94: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Agrobacterium tumefaciens

32% id,
89% cov

A5F699: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Vibrio cholerae

23% id,
98% cov

Q6G468: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Bartonella henselae

20% id,
96% cov

More...

dapB BLR17_RS07615 SAMN05192550_1545 WP_066324711.1: 4-hydroxy-tetrahydrodipicolinate reductase
is similar to:
PaperBLAST

Q3MFY8: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Trichormus variabilis

25% id,
70% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory