Searching in Pseudomonas benzenivorans DSM 8628 (GCF_900100495.1)
Found 15 curated entries in PaperBLAST's database that match '1.1.99.39' as complete word(s).
These curated entries have 10 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Pseudomonas benzenivorans DSM 8628, or try another query
| BLS63_RS16595 SAMN05216603_109178 WP_090446670.1: FAD-binding oxidoreductase is similar to: | PaperBLAST |
D2HDH_STUS1 / A4VGK4: D-2-hydroxyglutarate dehydrogenase; D-2-HG dehydrogenase; D2HGDH; D-malate dehydrogenase; EC 1.1.99.39; EC 1.1.99.- from Stutzerimonas stutzeri | 90% id, 100% cov |
Q9I6H4: D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Pseudomonas aeruginosa | 89% id, 100% cov |
D2HDH_XANCL / P0DV35: D-2-hydroxyglutarate dehydrogenase; D2HGDH; EC 1.1.99.39 from Xanthomonas citri | 54% id, 97% cov |
| BLS63_RS10140 SAMN05216603_10553 WP_009397186.1: FAD-binding oxidoreductase is similar to: | PaperBLAST |
D2HDH_XANCL / P0DV35: D-2-hydroxyglutarate dehydrogenase; D2HGDH; EC 1.1.99.39 from Xanthomonas citri | 38% id, 97% cov |
D2HDH_STUS1 / A4VGK4: D-2-hydroxyglutarate dehydrogenase; D-2-HG dehydrogenase; D2HGDH; D-malate dehydrogenase; EC 1.1.99.39; EC 1.1.99.- from Stutzerimonas stutzeri | 34% id, 99% cov |
SMc04384: (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Sinorhizobium meliloti | 35% id, 95% cov |
| glcD BLS63_RS18815 SAMN05216603_11268 WP_090447322.1: glycolate oxidase subunit GlcD is similar to: | PaperBLAST |
D2HDH_XANCL / P0DV35: D-2-hydroxyglutarate dehydrogenase; D2HGDH; EC 1.1.99.39 from Xanthomonas citri | 30% id, 97% cov |
D2HDH_STUS1 / A4VGK4: D-2-hydroxyglutarate dehydrogenase; D-2-HG dehydrogenase; D2HGDH; D-malate dehydrogenase; EC 1.1.99.39; EC 1.1.99.- from Stutzerimonas stutzeri | 29% id, 98% cov |
Q9I6H4: D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Pseudomonas aeruginosa | 28% id, 99% cov |
| BLS63_RS07810 SAMN05216603_103430 WP_090442216.1: FAD-binding oxidoreductase is similar to: | PaperBLAST |
Q9I6H4: D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Pseudomonas aeruginosa | 24% id, 93% cov |
D2HDH_STUS1 / A4VGK4: D-2-hydroxyglutarate dehydrogenase; D-2-HG dehydrogenase; D2HGDH; D-malate dehydrogenase; EC 1.1.99.39; EC 1.1.99.- from Stutzerimonas stutzeri | 23% id, 93% cov |
| BLS63_RS14300 SAMN05216603_107270 WP_090445668.1: FAD-binding and (Fe-S)-binding domain-containing protein is similar to: | PaperBLAST |
D2HDH_XANCL / P0DV35: D-2-hydroxyglutarate dehydrogenase; D2HGDH; EC 1.1.99.39 from Xanthomonas citri | 27% id, 62% cov |
Q9I6H4: D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Pseudomonas aeruginosa | 24% id, 61% cov |
D2HDH_STUS1 / A4VGK4: D-2-hydroxyglutarate dehydrogenase; D-2-HG dehydrogenase; D2HGDH; D-malate dehydrogenase; EC 1.1.99.39; EC 1.1.99.- from Stutzerimonas stutzeri | 23% id, 61% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 270494-273886 (frame -2) on NZ_FNCT01000007.1 Pseudomonas benzenivorans strain DSM 8628, whole genome shotgun sequence is similar to: | PaperBLAST |
D2HDH_HUMAN / Q8N465: D-2-hydroxyglutarate dehydrogenase, mitochondrial; EC 1.1.99.39 from Homo sapiens | 24% id, 64% cov |
Lawrence Berkeley National Laboratory