Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas benzenivorans DSM 8628 (GCF_900100495.1)

Found 17 curated entries in PaperBLAST's database that match '1.13.11.2' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Pseudomonas benzenivorans DSM 8628, or try another query

BLS63_RS02475 SAMN05216603_101490 WP_090439188.1: catechol 2,3-dioxygenase
is similar to:
PaperBLAST

E7DDG2: catechol 2,3-dioxygenase (EC 1.13.11.2) from Planococcus sp.

96% id,
100% cov

Q8KLV4: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas stutzeri

85% id,
100% cov

xylE / P06622: subunit of catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida
P06622: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida
Q7BH44: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas sp.
T1WIF8: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas sp.

83% id,
100% cov

More...

BLS63_RS10090 SAMN05216603_10543 WP_003292092.1: catechol 2,3-dioxygenase
is similar to:
PaperBLAST

xylE / P06622: subunit of catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida
P06622: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida
Q7BH44: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas sp.
T1WIF8: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas sp.

95% id,
100% cov

T1WJ05: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas sp.

95% id,
100% cov

Q8KLV4: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas stutzeri

92% id,
100% cov

More...

BLS63_RS02480 SAMN05216603_101491 WP_023086556.1: 2Fe-2S iron-sulfur cluster binding domain-containing protein
is similar to:
PaperBLAST

P23103: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida

64% id,
100% cov

BLS63_RS10085 SAMN05216603_10542 WP_003292091.1: 2Fe-2S iron-sulfur cluster binding domain-containing protein
is similar to:
PaperBLAST

P23103: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida

56% id,
94% cov

BLS63_RS02485 SAMN05216603_101492 WP_090439191.1: phenol 2-monooxygenase domain-containing protein
is similar to:
PaperBLAST

P23103: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida

31% id,
79% cov

gloA BLS63_RS23180 SAMN05216603_11989 WP_090448165.1: lactoylglutathione lyase
is similar to:
PaperBLAST

Q4J6K0: catechol 2,3-dioxygenase (EC 1.13.11.2) from Sulfolobus acidocaldarius

31% id,
27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory